CI01000037_01856899_01858932


Basic Information

Item Value
gene id CI01000037_01856899_01858932
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 1856899 ~ 1859007 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_01856899_01858932.mRNA
ATGAAAGATGTACTCTTGATCTGGATTCTGGGGACGATAGGCCTCTATGGATTATGTTTGGCGATGCAATCTCCAACTGCATGTGGAACCTTGACAACATGCGGCGTCACAGTACCATCTGCACGCCCGTACAGCTGGGAAACGTTGCTGGAGCTAAACTTTACGATGACTCAAGAGATGAGAACAGGCCAATTCAAAGATTTGTTTGAAAATATTCCTTACGAGCTGTTGAGAACAAAACGAAAGAAAAGAGAAAGAAGAAGTGGCATTCAGAGCCGATTGCGAAGGAGATTTAATCAGCCACCTCTGCCATCTATTGTCTTCAGTAATCTGCGTTCTCTGAATAACAAAGTGTATATGATAAGATCACACACAAGATACTGTAATGAATTTTGTGAGGCATCTCTGCTCTGCTTTACGGAAAGCTGGCTGCAGTCTACAATGCCTGACTCGCTCTTTGAGGTCCCTGGATTTACATTGGTACGAGCTGATAGAGACAAAGTTTTGGATAAAAAGTTGGTCATACCTACAAAAGAGATTAAAGTTTATCCAAATAACAAACTATATGTGACTAAAGATATTAAAGAAATTATAAATCTGAGGAAAGTAGCATTTAGGAATAAGGATATTAGGGTACTTAAACAGAAAGAGAGATTTGAATCAATAGATGATATACGTATACGTATACAGATGACTATCGAACTGACAAATGAAATCAGCACATTTTAAAGTATTCTGATGACACCGTTTTAATATCTGTGTTGAATGATTTGGACAGTCCTGGGTTTCATCAACAGGGTGTGA

Function

NR:

description
ReO_6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_01856899_01858932.mRNA True 804 mRNA 0.39 3 1856899 1859007

Neighbor

gene id symbol gene type direction distance location
CI01000037_01807429_01814912 NA coding upstream 41399 1807429 ~ 1815500 (+)
CI01000037_01788114_01805399 BIN1 coding upstream 51494 1788114 ~ 1805405 (+)
CI01000037_01739245_01747048 DES, DESMA coding upstream 109519 1739148 ~ 1747380 (+)
CI01000037_01690717_01697406 DNAJB2 coding upstream 159105 1690717 ~ 1697794 (+)
CI01000037_01685225_01686624 NA coding upstream 170161 1685225 ~ 1686738 (+)
CI01000037_01863914_01867331 MITD1 coding downstream 4907 1863914 ~ 1867436 (+)
CI01000037_01873612_01880555 KIAA1211L coding downstream 14605 1873612 ~ 1880555 (+)
CI01000037_01884695_01885456 NA coding downstream 25688 1884695 ~ 1885630 (+)
CI01000037_01890963_01896442 CREG2 coding downstream 31956 1890963 ~ 1896444 (+)
CI01000037_01925100_01960498 MGAT4A coding downstream 66093 1925100 ~ 1960722 (+)
G175004 NA non-coding upstream 76030 1762794 ~ 1780869 (+)
G175003 NA non-coding upstream 101717 1751814 ~ 1755182 (+)
G174949 NA non-coding upstream 242748 1613876 ~ 1614274 (+)
G174916 NA non-coding upstream 286420 1569917 ~ 1570479 (+)
G174900 NA non-coding upstream 398247 1396347 ~ 1458652 (+)
G175641 NA non-coding downstream 172539 2031546 ~ 2060079 (+)
G175670 NA non-coding downstream 205165 2064172 ~ 2064536 (+)
G175674 NA non-coding downstream 214421 2073428 ~ 2073640 (+)
G175689 NA non-coding downstream 280582 2139589 ~ 2139812 (+)
G175693 NA non-coding downstream 283944 2142951 ~ 2143263 (+)
CI01000037_00987906_00988350 NA other upstream 867140 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 1626503 228809 ~ 230730 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 106735 1965603 ~ 1966435 (+)
G176346 NA other downstream 980753 2839760 ~ 2840053 (+)
G176377 NA other downstream 1117855 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 2354276 4212907 ~ 4218305 (+)

Expression


Co-expression Network