CI01000037_01863914_01867331 (MITD1)


Basic Information

Item Value
gene id CI01000037_01863914_01867331
gene name MITD1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 1863914 ~ 1867436 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_01863914_01867331.mRNA
CCATCACAGAAACTAGATATGGCTCAGGATTTCCTCCCAGGCATGGAGAGCTCTGCTATCTCTGTCTTGAAGAGAGCTGTGGAGCTTGATCACAGCTCACGCTTTCAGGAATCTCTGGTGTGCTACCAGGAAGGGATCCAGCTCCTGTTGGATGTACTGAAAGCTGTTAAAGATGATTCAAAGAAGGTCCACTACAGAGAGAAGATCAAGGGCTACATGGACCGAGCAGAACAGATCAAAGTCCATGTGAACAAATTGAAAGAAGAGGGTAAATACCATGAGCAGATAAGGATAGCTGACAGCTCCACTGGTTTCAGCTACGAATCCCTCTTTAAACCATACATCAGAGACGGACTGACTGAAGTCTGGGTGGAGGACCCCTATGTACGGCATGTCCATCAGTTGTATAATTTTCTTCGTTTCTGTGAAATGCTGCTGAAATGTCCATGTAAAGTAAAGACGATTCACCTTCTGACCTCACAGGATGAGGACAGCTCCGCTCAACAAACCAATGCCCTGGCAGAAATAAAACAGTCACTACAGAGTCAAAATATCTGTCTGGACATTCAGTACTCCTCTACTATTCATGACAGGGAGATCAGGTTTAATAATGGTTGGATAATTAAGATCGGCAGGGGACTCGATTATTTCAAAAAACCAAAGGTACCACCTAAATTAAACAGTTATCAGGCTTGCATAATCATCTTCAGGGAATATGCAGAGGCTCCTGAGACCTACTACTCTTGCTTCATTGCTTCTATTCTGCTGTTTTTATACATTCTACACACTGATATTGGTGTTTATTATCTGGTCTGCCTCTTTAATTATGGCTCAGTTAAAGAGCAAGTGAATGCCAGAGATCACATCAACTTCACTTTCTCAACGATTTACATTATCAGCATGTGAGTATACGCGCCTACATTTATATTTATATTAAGTTTCAGGACAGTTTGTCGCGTTAATTTTGATTTGAGATATTGTTATAGTGGTAAGTTTTTGTTTTGTTTTTAA

Function

symbol description
mitd1 Predicted to be involved in midbody abscission. Predicted to colocalize with midbody. Orthologous to human MITD1 (microtubule interacting and trafficking domain containing 1).

NR:

description
mit domain-containing protein 1

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_01863914_01867331.mRNA True 1011 mRNA 0.41 8 1863914 1867436

Neighbor

gene id symbol gene type direction distance location
CI01000037_01856899_01858932 NA coding upstream 4907 1856899 ~ 1859007 (+)
CI01000037_01807429_01814912 NA coding upstream 48414 1807429 ~ 1815500 (+)
CI01000037_01788114_01805399 BIN1 coding upstream 58509 1788114 ~ 1805405 (+)
CI01000037_01739245_01747048 DES, DESMA coding upstream 116534 1739148 ~ 1747380 (+)
CI01000037_01690717_01697406 DNAJB2 coding upstream 166120 1690717 ~ 1697794 (+)
CI01000037_01873612_01880555 KIAA1211L coding downstream 6176 1873612 ~ 1880555 (+)
CI01000037_01884695_01885456 NA coding downstream 17259 1884695 ~ 1885630 (+)
CI01000037_01890963_01896442 CREG2 coding downstream 23527 1890963 ~ 1896444 (+)
CI01000037_01925100_01960498 MGAT4A coding downstream 57664 1925100 ~ 1960722 (+)
CI01000037_01965864_01966433 COA5, CB064 coding downstream 98167 1965603 ~ 1966435 (+)
G175004 NA non-coding upstream 83045 1762794 ~ 1780869 (+)
G175003 NA non-coding upstream 108732 1751814 ~ 1755182 (+)
G174949 NA non-coding upstream 249763 1613876 ~ 1614274 (+)
G174916 NA non-coding upstream 293435 1569917 ~ 1570479 (+)
G174900 NA non-coding upstream 405262 1396347 ~ 1458652 (+)
G175641 NA non-coding downstream 164110 2031546 ~ 2060079 (+)
G175670 NA non-coding downstream 196736 2064172 ~ 2064536 (+)
G175674 NA non-coding downstream 205992 2073428 ~ 2073640 (+)
G175689 NA non-coding downstream 272153 2139589 ~ 2139812 (+)
G175693 NA non-coding downstream 275515 2142951 ~ 2143263 (+)
CI01000037_00987906_00988350 NA other upstream 874155 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 1633518 228809 ~ 230730 (+)
G176346 NA other downstream 972324 2839760 ~ 2840053 (+)
G176377 NA other downstream 1109426 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 2345847 4212907 ~ 4218305 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location