XLOC_009090



Basic Information


Item Value
gene id XLOC_009090
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 15464976 ~ 15465590 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00018819
aagagcatccactgtgttgAACATATGCCTGAGTAGTTttcggttcattccggtgtggtgaCCCTTAAAGGATCATGGACTAAGCTGatgtaaaattaatgaatgaagataCTAGTATCCATATAGTAGTcctaaggatatctataagctagtgtgctccaaagcaGTGACGAAATGGACGTGTCCTGCTTCCTTCAAGACCCTGTTGCCATATGCACTCGAGCTCTTCACGTTTCAGTTAAAATTGTGTTACAAGTTGACCAAAAAtggacatttcaaagcacttcacaggacctttaactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatatttataaatttatatatatatatatatatatatagttttttttttttattttaatatttttttttctttcaaagtgCCATTAGCCATTAAGTTCCATTTTATGAATCTCCAAGGACTaatatttcagctaaaaatcttctttaattttcttctgaggaaaaaaaaattctacacatTGGATTGGCCTGAGGATaacattcatttaaaactttTGGGTGATTCCTTTAAGGTgtttttaggccccgtttacactagtgcgttttagttttaaaac

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00018819 True 615 lncRNA 0.34 1 15464976 15465590

Neighbor


gene id symbol gene type direction distance location
XLOC_009089 NA coding downstream 787 15463942 ~ 15464189 (-)
XLOC_009087 proca1 coding downstream 15047 15445113 ~ 15449929 (-)
XLOC_009086 NA coding downstream 77554 15381488 ~ 15387422 (-)
XLOC_009085 NA coding downstream 89458 15374059 ~ 15375518 (-)
XLOC_009084 ywhag2 coding downstream 107798 15348490 ~ 15357178 (-)
XLOC_009091 NA coding upstream 30511 15496101 ~ 15508393 (-)
XLOC_009092 NA coding upstream 203654 15669244 ~ 15675152 (-)
XLOC_009093 NA coding upstream 242475 15708065 ~ 15711173 (-)
XLOC_009094 synrg coding upstream 420259 15885849 ~ 15983428 (-)
XLOC_009095 hnf1ba coding upstream 531559 15997149 ~ 16012963 (-)
XLOC_009083 NA non-coding downstream 157225 15303727 ~ 15307751 (-)
XLOC_009081 NA non-coding downstream 434585 15028212 ~ 15030391 (-)
XLOC_009105 NA non-coding upstream 1088792 16554382 ~ 16555173 (-)
XLOC_009107 BX649487.1 non-coding upstream 1231925 16697515 ~ 16697916 (-)

Expression



Co-expression Network