G174900


Basic Information

Item Value
gene id G174900
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 1396347 ~ 1458652 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU198678
CTTTTTTTAATCGCATACATACTGGACTTGAGGGCAGAGGAGTTGACTTCAATTTCTCCTCCTTTGATTGGTTGGAAGCATGCGAGTTCAGAGTCATAGGGTTCTGGGCTGGACTGTCCTGTTAGGCTGCTACTTGTCCTTGTTCCATTCCCAGGACTCATGGCGCCCCTCTGCTGGGCCTCCTGCTCCTCGTACACAGCGATCAGCTTGTCCTTGTCCTCCACCAGGTCTGTTAGCACATCATCAGGGTCCAGAATACCCCCATCGCAGTATTCAACATGGTGGGTTCGTACAAGGAAATCTCCCTCCTGCTCTAGTAGTTTTCTGTATCTCTGGGTGGCTTGCTGGATGAGATCCCGCACTGTCCATCCTTCCTTACATGGGACAACAACACCAGTCCTTCCAAAACTCACTGTCACTTTCATTTTTAATCCAGACAGAGGACAATCAATCCAGATGTGTCCCTAAACAAACTCCAGCAGCAGCAGCAGGTGTGTGTGCTTGTGTATATTCAGCCAGGCTGCACGCTGCTTTTCTGCATCAAACTTTAGAGCATCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198678 True 560 lncRNA 0.49 3 1396347 1458652

Neighbor

gene id symbol gene type direction distance location
CI01000037_01098540_01104541 NA coding upstream 291161 1098072 ~ 1105186 (+)
CI01000037_01075201_01076456 NA coding upstream 319858 1073974 ~ 1076489 (+)
CI01000037_00987906_00988350 NA coding upstream 407975 987859 ~ 989246 (+)
CI01000037_00874555_00887437 NA coding upstream 508330 874487 ~ 888017 (+)
CI01000037_00808744_00809273 NA coding upstream 586474 808744 ~ 809873 (+)
CI01000037_01670886_01672687 TBA1A, TUBA1C, TUBA1B.L, TUBA8L3, TUBA4A, TUBA3E.L coding downstream 212234 1670886 ~ 1673145 (+)
CI01000037_01674415_01677266 TBA1A, TUBA1A.S, TUBA8L4, TUBA1A, TUBA8L3, TBA, TUBA4A coding downstream 215441 1674093 ~ 1677407 (+)
CI01000037_01685225_01686624 NA coding downstream 226573 1685225 ~ 1686738 (+)
CI01000037_01690717_01697406 DNAJB2 coding downstream 232065 1690717 ~ 1697794 (+)
CI01000037_01739245_01747048 DES, DESMA coding downstream 280496 1739148 ~ 1747380 (+)
G174828 NA non-coding upstream 111364 1241797 ~ 1284983 (+)
G174826 NA non-coding upstream 157148 1238903 ~ 1239199 (+)
G174825 NA non-coding upstream 158408 1237701 ~ 1237939 (+)
G174789 NA non-coding upstream 162882 1195075 ~ 1233465 (+)
G174758 NA non-coding upstream 308909 1084088 ~ 1087438 (+)
G174916 NA non-coding downstream 111265 1569917 ~ 1570479 (+)
G174949 NA non-coding downstream 155224 1613876 ~ 1614274 (+)
G175003 NA non-coding downstream 293162 1751814 ~ 1755182 (+)
G175004 NA non-coding downstream 304142 1762794 ~ 1780869 (+)
G175641 NA non-coding downstream 572894 2031546 ~ 2060079 (+)
CI01000037_00228809_00230442 NA other upstream 1165951 228809 ~ 230730 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 507090 1965603 ~ 1966435 (+)
G176346 NA other downstream 1381108 2839760 ~ 2840053 (+)
G176377 NA other downstream 1518210 2976862 ~ 3087968 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location