Gene
RNA
| Item | Value |
|---|---|
| gene id | G176377 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000037 |
| NCBI id | null |
| chromosome length | 4612320 |
| location | 2976862 ~ 3087968 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU200353 | True | 57691 | TUCP | 0.37 | 2 | 2976862 | 3087968 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000037_02965392_02966406 | FAM155A | coding | upstream | 10429 | 2965392 ~ 2966433 (+) |
| CI01000037_02909777_02910445 | NA | coding | upstream | 66373 | 2909600 ~ 2910489 (+) |
| CI01000037_02907711_02908412 | NA | coding | upstream | 68228 | 2907063 ~ 2908634 (+) |
| CI01000037_02755842_02769590 | NA | coding | upstream | 205696 | 2755842 ~ 2771166 (+) |
| CI01000037_02700254_02707760 | GPR89B, GPR89, GPR89A, GPR89B.L | coding | upstream | 268388 | 2699595 ~ 2708474 (+) |
| CI01000037_03102630_03108094 | NA | coding | downstream | 14662 | 3102630 ~ 3109016 (+) |
| CI01000037_03120937_03121997 | ABHD13 | coding | downstream | 32969 | 3120937 ~ 3122022 (+) |
| CI01000037_03126487_03134212 | TNFSF13B | coding | downstream | 38055 | 3126023 ~ 3135221 (+) |
| CI01000037_03224616_03371497 | MYO16 | coding | downstream | 136648 | 3224616 ~ 3371497 (+) |
| CI01000037_03716200_03741974 | NA | coding | downstream | 627729 | 3715697 ~ 3743023 (+) |
| G176361 | NA | non-coding | upstream | 113493 | 2863024 ~ 2863369 (+) |
| G176357 | NA | non-coding | upstream | 124136 | 2852378 ~ 2852726 (+) |
| G176355 | NA | non-coding | upstream | 126936 | 2849609 ~ 2849926 (+) |
| G176328 | NA | non-coding | upstream | 150555 | 2825982 ~ 2826307 (+) |
| G176323 | NA | non-coding | upstream | 153760 | 2822713 ~ 2823102 (+) |
| G176466 | NA | non-coding | downstream | 381534 | 3469502 ~ 3469710 (+) |
| G176472 | NA | non-coding | downstream | 389940 | 3477908 ~ 3478177 (+) |
| G176475 | NA | non-coding | downstream | 394871 | 3482839 ~ 3483057 (+) |
| G176494 | NA | non-coding | downstream | 416739 | 3504707 ~ 3504925 (+) |
| G176501 | NA | non-coding | downstream | 447257 | 3535225 ~ 3535554 (+) |
| G176346 | NA | other | upstream | 136809 | 2839760 ~ 2840053 (+) |
| CI01000037_01965864_01966433 | COA5, CB064 | other | upstream | 1006471 | 1965603 ~ 1966435 (+) |
| G174949 | NA | other | upstream | 1362588 | 1613876 ~ 1614274 (+) |
| CI01000037_00987906_00988350 | NA | other | upstream | 1987103 | 987859 ~ 989246 (+) |
| CI01000037_04213179_04218057 | NA | other | downstream | 1125315 | 4212907 ~ 4218305 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| rainbow trout (Oncorhynchus mykiss) | G881531 | LOC100194703 | non-coding | NC_048574.1 | CM023228.2 | 34494555 ~ 34562820 (+) |
