G176509


Basic Information

Item Value
gene id G176509
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 3542560 ~ 3542777 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU200485
AAAACATACAGTATACAGGGAAACATGATGGCAAAGTGTTTTGGTGGCTCATATTTGTGGGTAGTCTCTCAGACAGTGGCACTGCTGGTTTGGCATAATTGCCCCCTTCTGCCTGTGCAATGACTACTGTGCCCCCGCTGTGGGCACTAACTGGTCTTGCAGGGTGCTAAGAGATTTTATAGAGCAATTACTGTGGATTAAACTAATAAATGAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200485 True 218 lncRNA 0.44 1 3542560 3542777

Neighbor

gene id symbol gene type direction distance location
CI01000037_03224616_03371497 MYO16 coding upstream 171063 3224616 ~ 3371497 (+)
CI01000037_03126487_03134212 TNFSF13B coding upstream 407339 3126023 ~ 3135221 (+)
CI01000037_03120937_03121997 ABHD13 coding upstream 420538 3120937 ~ 3122022 (+)
CI01000037_03102630_03108094 NA coding upstream 433544 3102630 ~ 3109016 (+)
CI01000037_02965392_02966406 FAM155A coding upstream 576127 2965392 ~ 2966433 (+)
CI01000037_03716200_03741974 NA coding downstream 172920 3715697 ~ 3743023 (+)
CI01000037_03761579_03791584 NA coding downstream 218802 3761579 ~ 3792055 (+)
CI01000037_03804670_03806154 NA coding downstream 261200 3803977 ~ 3806468 (+)
CI01000037_03811261_03823037 CARKD coding downstream 268484 3811261 ~ 3823115 (+)
CI01000037_03824405_03854894 ANKRD10B coding downstream 281431 3824208 ~ 3855194 (+)
G176507 NA non-coding upstream 1508 3540725 ~ 3541052 (+)
G176503 NA non-coding upstream 5534 3536570 ~ 3537026 (+)
G176502 NA non-coding upstream 6274 3535923 ~ 3536286 (+)
G176501 NA non-coding upstream 7006 3535225 ~ 3535554 (+)
G176494 NA non-coding upstream 37635 3504707 ~ 3504925 (+)
G176510 NA non-coding downstream 2512 3545289 ~ 3545750 (+)
G176554 NA non-coding downstream 14405 3557182 ~ 3557382 (+)
G176633 NA non-coding downstream 324065 3866842 ~ 3867120 (+)
G176635 NA non-coding downstream 325436 3868213 ~ 3868430 (+)
G176636 NA non-coding downstream 326021 3868798 ~ 3869005 (+)
G176377 NA other upstream 454592 2976862 ~ 3087968 (+)
G176346 NA other upstream 702507 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 1572169 1965603 ~ 1966435 (+)
G174949 NA other upstream 1928286 1613876 ~ 1614274 (+)
CI01000037_04213179_04218057 NA other downstream 670506 4212907 ~ 4218305 (+)

Expression


Co-expression Network