XLOC_009236


Basic Information

Item Value
gene id XLOC_009236
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 24968092 ~ 24974112 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018824
CTTTCTGCGATGATGATTGTTGGGTTTTGGTTTTGCATTGGTTTCTTTTTCATCTTCTTCTCTTGCAGGCGTGTGGTTGTATAGTCCCAGTGAGGGGTGTTTGGTCTCTGGAGGAGAGCCGCTCTAATGAGACTTGAACTGTGGTGTTTCTGCTTCATGGCCCAACAGACGCAGTCATCACTCTGTCTGATCCTTGACGTCACGGTGCTCACAATCAGAGCAGGAACAACCCGACGAAGACGACAGAAGTGTATCCAATCTCTTCTCGTAATTCATGAGCTTCTTCAGCTCGTCCTAACATGTGTAAACAGCTGTAGCGTGTTGGCCGTGTGATATATGAGTGGAGGAATGAAGATAACTCTTTGTTTACTGTAATGGTGGTGCTTAGACACTTTTGCTGGTAATTGGCTGATTTATGCATGCAGGTTGTATATTAGGAAGGTTAGTAGGTTTAGTTTTCCACCGTGATCATGAAGTGCATCTATTTATCAATGTGGCATGTCAGTATGAACCACCTGTTATGAGTATTTACTGTGTTTCTTAGGTTTTATATCAATTCCACTGTACTGTTTTATTATTTAGGATATGCATTATGTGAGTCATAATCatattatttaagtttttatgtGTAAACTGTACAAAATGGCTGTGATTTTTAACTGTAAAAGCTGCAAACATGCTACATTAAAAGTCtggttaacagtaagtttccttaatatatatggTGGAAAACTGTGAATTGACTTTCACAGAATTCCCCGAATGACACTTTTGTTTTCTGTTGACATTACTATAGTTCTGTGGTGTACTTTAATGCCTTACTTTGCATTGCTTTAGTGTCATGTGTGTGACCATGATGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018824 True 860 lncRNA 0.39 2 24968092 24974112

Neighbor

gene id symbol gene type direction distance location
XLOC_009235 abhd15a coding downstream 7311 24946321 ~ 24960781 (-)
XLOC_009234 NA coding downstream 40999 24901551 ~ 24927093 (-)
XLOC_009233 aipl1 coding downstream 83308 24873388 ~ 24884784 (-)
XLOC_009232 trarg1a coding downstream 98266 24845145 ~ 24869826 (-)
XLOC_009231 tmem199 coding downstream 291777 24673283 ~ 24676315 (-)
XLOC_009237 si:ch211-198e20.10 coding upstream 33097 25007209 ~ 25010400 (-)
XLOC_009238 pimr190 coding upstream 61835 25035947 ~ 25039083 (-)
XLOC_009239 pimr191 coding upstream 105929 25080041 ~ 25083200 (-)
XLOC_009240 exo5 coding upstream 110709 25084821 ~ 25094026 (-)
XLOC_009241 rflnb coding upstream 119179 25093291 ~ 25099679 (-)
XLOC_009230 NA non-coding downstream 349187 24592325 ~ 24618905 (-)
XLOC_009228 NA non-coding downstream 405031 24561821 ~ 24563061 (-)
XLOC_009227 CU313324.1 non-coding downstream 809025 24158953 ~ 24159067 (-)
XLOC_009205 NA non-coding downstream 1813832 23144954 ~ 23154260 (-)
XLOC_009254 NA non-coding upstream 724700 25698812 ~ 25876120 (-)
XLOC_009256 CR848822.3 non-coding upstream 1020868 25994980 ~ 25995095 (-)
XLOC_009257 CR848822.2 non-coding upstream 1101251 26075363 ~ 26075480 (-)
XLOC_009258 NA non-coding upstream 1143082 26117194 ~ 26183974 (-)
XLOC_009259 CU179658.2 non-coding upstream 1300528 26274640 ~ 26274757 (-)

Expression


Co-expression Network