XLOC_009238 (pimr190)


Basic Information

Item Value
gene id XLOC_009238
gene name pimr190
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 25035947 ~ 25039083 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018155
TGGAGTTTTCAGTTGATCGTGATATAACAAATATTCAGTTCGCCGTTGATAACAATTCTCTCGAGTTTGGAAAGAAACATAGAACAATGGGACGAGTTAGAAAGAGAGTAAAACAGTTCTGTAACTGGGCCTCTCGGAAATCCGGGAAAGCCCAGCAGAACCAGTGCACATCCGAGGGCGACCTCGAGCACCGGAGATGTTCTGATGACGAAGCCGGACCGAGCAACGCTACGTTCATCTCCCACATTCACACTGGAGCTGGTGTTTCACCAAGCCCAGCACCACAGACAAGAGAGAAGAAACTTAAGAGGCTCTGGAAATGGTTTTCTCGGAAATTCAAGAGAACTAGAACCAGAGCCCCACAGGGCCAGCTGAGCAGCCCACAGCCTCAGAGATCCCCTGACGGTGAAGCTGCGTGTGTGTCGCCGAGGACAGTTCATGATGAGCGGGTTAACAGGCGCGTGTCTATCCAGACCCCTGTGAAGACCCCGTCAACAGAAACTGAACGGCACGACAACACTGAATGCTGGGACTTTTCTGTATCTTCTCTTACCACTGCGGGAAACAGCGAATCCGACCGCGCTTCAGTGCACAGCTGGCACTCGTGTGCGTCTTCGCTTGGCACCCCGGTTATCAGTGAATCTGACCGCGCATCAGTGTTAAGTTGGCACTCTTGTGCGTCTTCGCTTGGTACCGCGGGGATCAGCGAATCTGACCGCGCTTCAGTGCACAGTAGGCACCCTTGTGAGTCTTCGCTGACCGCTGAACACCACAACGATGAGGAAAACGCTTCCAGCGAGGACTCCAGCGTGTCCGAGGACAGCACATCTTCCTCATCGGATTTTTGGAAAACAGAACAGGAAACCACATTTAACTGGGAAGGAAATACAGgTAGAATCTCCCAGGACTATAAAATCCATCACTTGATTGGTCAGGGATCAACAGGAGTCATCTATGATGGAATTCGTCTGTCGGATTGCCGAATGGTGGATATCAAATGCGTGAAGAAGAGCAAATCAATGGAAAGGATCACGATTGAACCATCTGACAAGACTGTTCCACGAGAGGTCGGTTTGATGATTATGATGAGCAGAGGTCCGAAGGTTCCTCAAGTTATACAGCTGCTGGACTGGTATGAGGCACCAGACCGATACATACTGGTGCTGGAGCATCCCAAATCAGCTGTGAGCCTGGACCAGTTTGTATCCTCTTGTGGGAACAAAATCAGCGAAGCGAAAGCACGAGTGGTGATGCACCAGGTGATCACTGCTGCCAACGCATGCTGCGAAAGGGGAGTCTACAATAACATCAAGCTGGAGAGCCTGCTCATCAACCCCCACACCTTGCAGGTCAAACTGATGGACTTTGGCACGGGAAGCCTCATTAAGGACTCTGGCTATACAAAATTTTGGGGCTCAATAGCTTGTATTCCCCCGGAGTTCTATCAGAAGGGAAGGTTCCACGCCAAGCCTGCAATCGTGTACTCTTTAGGCAAACTGTTGTTCAGGATGCTGTGTGGACACTACCCTCATATGGAGCTCCACAAGATTGTCAAAAGAACCTGGCAGCCTGAAGACCTATCCAAAGAAGCCGTAGATCTGATCTGCTCGTGTCTGCAGACTAAGCCAGACAAGCGGCCTCTACTTGACGAGATCCTTCACCAGAGATGGTTCCAGGTCTTCATCCTGAAGCCAAACAACAGACGAAAAGATTAAGAAGATCAGAACATCCAGCCGTCAACACCAAACTTCTCCTCTTCATCGATCCACTAACACCGAACTCCTCCTCTTCATCCAGCCACTAACACTAAGCTCCTCTTTTCTATTTAGCCAGAAACTCCGTCAAGCCACAAACATGGGGCAGTTTGTGGCTTTACGAAGAGAAAAAGCTGAATAGGGCTGGTGTTTGTGGTTGCGTGGAAAGGAGGAGCTGTTTGGGGCCGGTGTTTGTGGTTGATAAAGAGGAGGAGCTGAAGGGGGCCGGCGTTTGTATCTGGATGAAGAGAAgaagattttttgtttatttttggagattgtaaataaatgcTTGTTCTGTatgtaatgaataaaaatgaatacttTTCACA

Function

symbol description
pimr190 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131119-2 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDARG00000087757

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018155 True 2086 mRNA 0.49 6 25035947 25039083

Neighbor

gene id symbol gene type direction distance location
XLOC_009237 si:ch211-198e20.10 coding downstream 25547 25007209 ~ 25010400 (-)
XLOC_009236 NA coding downstream 61835 24968092 ~ 24974112 (-)
XLOC_009235 abhd15a coding downstream 75166 24946321 ~ 24960781 (-)
XLOC_009234 NA coding downstream 108854 24901551 ~ 24927093 (-)
XLOC_009233 aipl1 coding downstream 151163 24873388 ~ 24884784 (-)
XLOC_009239 pimr191 coding upstream 40958 25080041 ~ 25083200 (-)
XLOC_009240 exo5 coding upstream 45738 25084821 ~ 25094026 (-)
XLOC_009241 rflnb coding upstream 54208 25093291 ~ 25099679 (-)
XLOC_009242 vps53 coding upstream 61643 25100726 ~ 25153403 (-)
XLOC_009243 mnta coding upstream 133588 25172671 ~ 25209308 (-)
XLOC_009230 NA non-coding downstream 417042 24592325 ~ 24618905 (-)
XLOC_009228 NA non-coding downstream 472886 24561821 ~ 24563061 (-)
XLOC_009227 CU313324.1 non-coding downstream 876880 24158953 ~ 24159067 (-)
XLOC_009254 NA non-coding upstream 659729 25698812 ~ 25876120 (-)
XLOC_009256 CR848822.3 non-coding upstream 955897 25994980 ~ 25995095 (-)
XLOC_009257 CR848822.2 non-coding upstream 1036280 26075363 ~ 26075480 (-)
XLOC_009258 NA non-coding upstream 1078111 26117194 ~ 26183974 (-)
XLOC_009259 CU179658.2 non-coding upstream 1235557 26274640 ~ 26274757 (-)

Expression


Co-expression Network