XLOC_009258


Basic Information

Item Value
gene id XLOC_009258
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 26117194 ~ 26183974 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018827
GCTCACTCCGGCACAAGGAAATCTGGACCCATCTGGTTGATTTGACTTGTGTGATTGCTCTGCCACATGCCCAGGTGCAGTTTGCTAAGCCATGGCCTGCCTAACTTGAAGAGGCTCTCTCTGGCTCCAGCAAAGGGCTATTCCTGCGTCCTGCAGTCTGCTGTCATCGGCCGGATATCTTCATGTCAGAGACAGGGTGGGAAGGGAGGAGGACCATGTCTCAGGTGGACTGGACTGGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018827 True 240 lncRNA 0.55 2 26117194 26183974

Neighbor

gene id symbol gene type direction distance location
XLOC_009255 dph1 coding downstream 28130 25910501 ~ 26089064 (-)
XLOC_009257 CR848822.2 coding downstream 41714 26075363 ~ 26075480 (-)
XLOC_009256 CR848822.3 coding downstream 122099 25994980 ~ 25995095 (-)
XLOC_009254 NA coding downstream 241074 25698812 ~ 25876120 (-)
XLOC_009253 taok1a coding downstream 488148 25588357 ~ 25629046 (-)
XLOC_009259 CU179658.2 coding upstream 90666 26274640 ~ 26274757 (-)
XLOC_009260 CU179658.1 coding upstream 114655 26298629 ~ 26298747 (-)
XLOC_009261 NA coding upstream 287362 26471336 ~ 26496219 (-)
XLOC_009262 rpa1 coding upstream 314365 26498339 ~ 26538989 (-)
XLOC_009263 serpinf2b coding upstream 357007 26540981 ~ 26552652 (-)
XLOC_009236 NA non-coding downstream 1143082 24968092 ~ 24974112 (-)
XLOC_009234 NA non-coding downstream 1190101 24901551 ~ 24927093 (-)
XLOC_009266 NA non-coding upstream 460385 26644359 ~ 26647276 (-)
XLOC_009270 CR848825.1 non-coding upstream 808135 26992109 ~ 26994461 (-)

Expression


Co-expression Network