XLOC_009275 (AL954187.1)


Basic Information

Item Value
gene id XLOC_009275
gene name AL954187.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 27642233 ~ 27658455 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018238
GCTCAAGCGCAAAATGCCCTAGGTGACGAAGCACAGAAGAATTGCACAACAAATTTGATTCAATGGTGAGGGATGTCAAGCCCACCGAGACGAGTGGAGGTCCAGTGGATTAAAGCAATGTCACAACATGAGCCACTGACCCGGGATCAGACAGCCAAACCAAGCCGCTTCTGGACTTTACTGGCACAGCTGCGTCCATTAGGCAAAATGCTCAGAAA
>TCONS_00019176
CGCTGCTGAAGTCACAGTGAAACACCACTTGGTGGTGCTCAAGCGCAAAATGCCCTAGGTGACGAAGCACAGAAGAATTGCACAACAAATTTGATTCAATGGTGAGTTTCTTGTAGCTTCATTTTCTTTCATGGCTTGTACGTTTTTTCCAGCAAACTTTTAACCACTGAGCTTTGTGTGCTGTAATGGAGGAGGTCAAACAGAATGAAGTGGAAAAGCTTTCGTGATAAATACACAAGTAAAAGATGATTTCCAGGGAAATCATACAAGAGGATATGAGGGTATCACGCTAATGGATATGGCTCTCTGAGTATACTTATAGACAAACAAATACATGCTTGCACCTGGATACACACGTGCTGCTCTGCTAAACACCTGGACCTCCTCACAAGATGGTTGCTTGCTCATGTGTACACATTCCTCCCTCAAGTTGATGCTCCAGAAAGctaataaaattgtatttcatgccattcagccaAACAACAGATACATATTTGCTGCTTTAATGGAGGCTTTTGAGTGGGCGGCTCCACAAAACAGGAAATTCTCTCAAGTGGACTTTTGTTCAAATAAGCACCTCTCATCAGTCTTTCAGGTCTGTTGAAAACAGTGTCAGATGTGGCATCATCACACTCATTCCACTCTAACATCTAAAGGATCCGTCATGAGCCGTGAGCATTTATAGAGAGAAAATGCACTGCGAATGTTTTTCACATGTGCGAGGAAACATTATTGTGTTTCTGAATGCAGACAAGAACATGAAGCTTGCTAGTGTTGACCTAACGTAGCAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096642

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018238 False 218 lncRNA 0.50 2 27642233 27658419
TCONS_00019176 True 792 lncRNA 0.42 2 27656846 27658455

Neighbor

gene id symbol gene type direction distance location
XLOC_009274 brip1 coding downstream 119395 27415772 ~ 27522838 (-)
XLOC_009273 NA coding downstream 228232 27391544 ~ 27414001 (-)
XLOC_009272 NA coding downstream 277743 27352522 ~ 27364490 (-)
XLOC_009271 NA coding downstream 335145 27303279 ~ 27307088 (-)
XLOC_009270 CR848825.1 coding downstream 647772 26992109 ~ 26994461 (-)
XLOC_009278 NA coding upstream 1790 27660245 ~ 27661117 (-)
XLOC_009279 lhx1a coding upstream 44954 27703409 ~ 27710575 (-)
XLOC_009280 NA coding upstream 126095 27784550 ~ 27956162 (-)
XLOC_009281 CR391930.2 coding upstream 264523 27922978 ~ 27923093 (-)
XLOC_009282 CR391930.1 coding upstream 312843 27971298 ~ 27972474 (-)
XLOC_009266 NA non-coding downstream 994957 26644359 ~ 26647276 (-)
XLOC_009284 NA non-coding upstream 352275 28010730 ~ 28015128 (-)
XLOC_009291 CR478288.1 non-coding upstream 698390 28356845 ~ 28357872 (-)

Expression


Co-expression Network