XLOC_009291 (CR478288.1)


Basic Information

Item Value
gene id XLOC_009291
gene name CR478288.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 28356845 ~ 28357872 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018263
ACAGTTGCTTAATGTCAcacgacaacgttgctacagccttctcacgtcttaACAATGTAGCGAGCACGTAAGCGGTTAGTGGTGATGTTGCCTTTGAAAACATGCAACGTTGTAcagacatcgctacaacgtaaatgtgtttgttggCGAAGTGCCTTCTTAATACGTCTGCAGAAAAGACGCCGCGGCCTGCTGAGTTTGTTGACAGCTGATCCCATTTGTTTAAGCGCAGACTGAAGATATCGGCCTGTTCTTGGTTTGAGGCCTGAAAACGCATCTGATCCTGAGAGTGACTGTAGAACATAGTACAAGGCGGCCAGAAACTCCTGCACGCTGGTGTGGAGGAAATGAAAGCCCTTTTCTAAGGTGAGGGACGCTCGATCCTCTTTAAGGATCTCGAAGAGGAACACCTGTGAGAGTTTGGTGCTATCCAGATTAAAAGAGTTTATATCGGAGCTTTCAAAGATGAATCGTCTCTCCAGGAGGCCTTTGAAGGCCATCGCCCCGAGACTTTTGAGTACTGGCTGCATTTCAGCCAGGACATGAGGAGCATGCTGAAGCCTGGTGTGATGGGAGCCCTCGCTTCGCCCTTGGGCATGGAACAGCACGATGGATTTAACGAAACAGCAGTAAATCTCGGTGATCGTCACAGGTTTGGAGCTCATCTCAGAAGGTATCTGTAGGTCATCTTTATCGAGGCCTTCTTGCTCTCCTGACTTGGCATTTACAGGATCAGGATAAAGGCAGGAGCCACCGTCATGCAAGGCAGTGGACACAATCCAACAGAATGCGGGAATGTGGCACATGAGGAGAAGGGGTTTATGGGACGACACTGAGGCCCAAACTGCAGCAGCAGCCTCAGGAGATCTGCAGTTCTTCTCAAAGTACTGCTTCTGCTGATCTACAGAGAAACCCAACAGGCTGTAATACTGGCTGACCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096593

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018263 True 941 lncRNA 0.49 2 28356845 28357872

Neighbor

gene id symbol gene type direction distance location
XLOC_009290 prpf8 coding downstream 94136 28248052 ~ 28262709 (-)
XLOC_009289 rilp coding downstream 109262 28227058 ~ 28247583 (-)
XLOC_009288 scarf1 coding downstream 132939 28208440 ~ 28223906 (-)
XLOC_009287 sarm1 coding downstream 156796 28188362 ~ 28200049 (-)
XLOC_009286 foxn1 coding downstream 195621 28129683 ~ 28161224 (-)
XLOC_009292 CR478288.2 coding upstream 17641 28375513 ~ 28375627 (-)
XLOC_009293 git1 coding upstream 73749 28431621 ~ 28480576 (-)
XLOC_009294 NA coding upstream 142174 28500046 ~ 28541766 (-)
XLOC_009295 ssh2a coding upstream 187271 28545143 ~ 28587490 (-)
XLOC_009296 NA coding upstream 236671 28594543 ~ 28596509 (-)
XLOC_009284 NA non-coding downstream 341717 28010730 ~ 28015128 (-)
XLOC_009280 NA non-coding downstream 400683 27784550 ~ 27956162 (-)
XLOC_009281 CR391930.2 non-coding downstream 433752 27922978 ~ 27923093 (-)
XLOC_009278 NA non-coding downstream 695728 27660245 ~ 27661117 (-)
XLOC_009277 AL954187.3 non-coding downstream 702553 27654176 ~ 27654292 (-)
XLOC_009299 BX950186.1 non-coding upstream 377055 28734927 ~ 28735041 (-)
XLOC_009300 NA non-coding upstream 400583 28758455 ~ 28772574 (-)
XLOC_009275 AL954187.1 non-coding downstream 698390 27642233 ~ 27658455 (-)

Expression


Co-expression Network