XLOC_009295 (ssh2a)


Basic Information

Item Value
gene id XLOC_009295
gene name ssh2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 28545143 ~ 28587490 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018267
TGGTGTGTTATTGTATTGTTCAGATTTCTTACATTTAATCAACAATTAACAAATATACAATATACTTTTAacttatttgttgtttttgctgttatgtgTGCTCTGCATGTTTTGTAAGGTTTGCCCAGAAACACTCTCGGCTCTCCGAAAACActtgctaaatttatttattttcccctgTTCCAATGTTCTTTTTAAACCTTAGCTATTCATAGGAGCCACTTGACTGGCCATGGAAAACAACTGTCTGCACTGAAGGATGCACTGAAGTGCACTCCAGACTCGTGATTTCGCAGCTGAGCTCGGATTGCCCGTGCTGCGTCGTGTCGTTGCTTCGGTTTCTGAAATGTGGGCCGTCTGTGGAGCCCTACATTGGACCCGTCCCGAAGCACATGTCAGCAGCTCCTCCTTCTCGCTGTTCAAGCATTAGTGCGCCGCACCGCAGTTCCTCCATAcagacagtatgtgtgtgtgtgtgtatgtgtgtgagtgagtgaagcTCGCCGGCTCATGCCAAAGCAAAGCAGCATGTACGTATTGTTTTTTTAGGTTCTCATGTTGTTTTATATTCGTTTAGTGGTTATAGAAGAAACGGCCAACTTTCCAAGgactgatttgtttttgttttattaaccaTTGCGCTGTTTTGAGGCCACGTTGGTTTCCTATTAAGGCCTTATGGACGggtcattttaaaactgtttaaccGGCTGGACGAAGCACTTAttgcaaaatttatttattttgggttgctTTTTATAATTCGGGGGAGTATTATGGCTGTTGAGTAGTCTGTCTGAGGATATCCGCTTCTTCGTCATGACGCTGGAGAGTGTGCCGATCACGGAGAGCTCCGCTGCCCGGGGATTCTGCTCCTGCTGCGGGGCAAAAATCATGCCGTACTTCACTGACAACGCGGTCGCTTCCCAAAACCAGATCAACCAGCTTATCAGCGAGAACTTCCTAACTGTGAAAGGTGCCGCCCTGTTCCTCCCGCGGGGAAATGGCTCCTCCTCTTCTTCAGCACCCCGCATCCCACAGCGGCGCAACAAACACACAGGTGACCTTCAGCAGCATTTGCAGACCATGTTCACCCTGCTGCGTCCAGAGGACACAATTCGCCTGGCTGTCCGGTTAGAAAGTGCTTATGCTGTCCGTACACGGTACATGGTGATCATTTCCACCAATGGTAGACAGGACACCGAAGAAAGTGTGGTGCTGGGAATGGATTTCAGTAACTCAGACCGAACTTGCACTGTCGGGCTGGTTTTACCCTTATGGAGCGATACGCTTATACACTTGGATGGAGACGGTGGCTTCAGCGTGTCCACCGTTAACCGCGTCCATGTCTTCAAACCAGTCTCCGTGCAGGCCATGTGGTCAGCCTTGCAGTCCCTGCATAAGGTTTGCGAGGTTGCCCGATGTCATAACTACTACCCCGGCAGTCTCTTCCTGACCTGGGTTAGTTACTATCAGAGTCGCGTGACCTCCGATCAGCACTGCATCAATGAATGGAACGCAATGCAAGACGTGCAGTCCCACCGTGCAGACTCTCCTGTGCTGTTCACTGATGTGCCAACTGAGAGAGAGCGAACGGAGAGACTGATTAAGACCCGCTTGAGAGAGATCATGATGCAAAAGGACTTGGAGAACGTCACTTCGAAAGAGATTCGGACTGAGCTAGAAATGCAAATGGTTTGCAACCTGCGAGAGTTCAAGGAGTTCATTGATAATGAGATGATCGTCATTCTGGGCCAGATGGACAGCCCCACTGAGATCTTTGACCATGTTTACCTGGGTTCAGAGTGGAATGCCTCTAACCTTGAGGAACTCCAGAACAGCGGGGTTCGCTACATCCTGAATGTGACGCGAGAGATTGATAATTTCTTCCCCGGGCTATTTGAGTACCACAACATACGAGTCTATGACGAGGAGGCCACAAACCTCCTGGAGTATTGGAACGACACCTACAAGTTCATTTCAAAAGCCAAGAAAGCAGGGGTGAAGTGTCTAGTGCACTGTAAGATGGGAGTGAGTCGTTCTGCTTCCACCGTGATTGCTTACGCTATGAAGGAGTATGGCTGGGACCTGGATAGAGCCTTTGACCATGTGAAGGAACGGCGCTCTGTCACCAAACCAAACCCGTCTTTCATGAAGCAGCTGGAAGAGTACCAGGGTATCCTGCTTGCCAGCAAACAGAGGCATAACAAGTTGTGGCGTTCCCACTCAGACACTGACCTCTCGGATGGTCACGAGCCACTGTGCAAGACCCCTCGCTCACTGGACCGCTCAGATCCTCACAACAACAATGGTTCTCTTTCTATCCAGCAGATGCTGGGCATTGCTGTGCTCGAATCCCTTACCAATCCCCGACCTGTTGCATGCAACACCCATAAAAAATCGGGTGAGACACCCTCAAAGCTAGCACATGAGGACCTCTTCCTCCTTCCTCAATCCAGACAACGAGCTGCCACAGTGGGCTCTAAGCAGAGGAACTCCACTTTGATCCTTGCGGTGCGAGAGCCTGTTTCTCACCGTCACCCACCTCCTGCTCTACACGTCCTCGATTCTCCTCTTTTACCAGAGGAGAGAGGAGGAGACACGACTCCAAACCTCGGCGCCCAGTCGTCTCACCAAGTGCCTGAGCCAAAAACAGACTGTGTTGAGTTGTCCCCCGACTTGCCTGATCAAAATGACTCTTATCAAGTGTCACAAAGCTTAGAACTGTGTCTGGAAAGTGCTGTCAGTAAAGATGAAGGGAATCTGCCTTCTTCAAGTACGCCTGAGGCTGACAGCCCTTCGGAAGCCCCTGCTGTACCAGAGCTGGTCTCCAGTGATGATAACAACAACCCTAATGCAGCAGATCTAGAAGCGGCAGACGACTGTACGGATGCCAGCGTGTCTCGCCTCAGCACAGATAGCATTGACTTTTTTAGTGCTAGAGAAAAGTTCCTCTGCCTATCCCAGGACAATCACCCTTGCTCACTTTCTGAAACAACTGCAGTGCAGTCACCTCCGGCCAGATGCACCTCACCCTTGGATCACCCTAGTGAGGAACCTGAGGAGGAGTGCCACACCCATTCAGAGGAGCATAGCGACGCAGTGCTCCAACCCTCTGCTCATGACAGTACTGTGTCTGTGCGTCATATAGTTACTGAACTGGAATCCACATCACAAACCAGCAGTCCGCCACTGGCACACACCTCACCTCAGACTGCAACACcagaggagaaggaggaggaggatgaggaaGCGGCTCCGGCTCCTCATTCTCTCTCCGACAGGCCCTCAGGATCCGTGCGCCGGGTGACTGAGCAGTTGGAGCTTATACTACGTCAGGGTCAAGAGATTCCTCTCTCTCGTTCACCTCTTCCTTCCCCATGTTTGGGCTGCACACAGTCTTACTCTGATGAGCCAGAAGATTCTCCTGCCCTCTCCCAAAAGACTCCACAGGGTAAAGGAGATGACACCAAAGTGCTTGATGATGAGGACTCTGGTATAATCCCCGATCCTTCCTTCTCTGTGTTTCTTGAGGGGAGTGTTTCATTGGAGGCCGACCAGATCACTTTGAACCCCACTCTTGAGCCCAGCTCTTGTTCTTCCTCcctgttgtggctggaaggagtAACTGAGCTGGAGACAGATGTAGATGATCCGTTAAGGCCTCAAGTGCGGCTAGCACGCAGCAGTGAGGATTTGCAGAAAATCCAGGAGACTCTCAGAGAGCTCCAGGCATTTTTATATGAAGCTGGGGGACTGGGAGTTAGCACTGGACAGGTTGAGGAAAACCGGTCGTCTGATGGCAGTGGGGAGCAGCGGTTTGAACCCAAAGCACCAGCGGTGTGGCAGAGAGCCATGGAAATTGAGGCCCGCATCAGACAAGCCGGCCTCACTCCTCCCTCACTCATGAAACGCTCTGCCTCACTTGCTAAATTGGACCGGCTAGAGCTGTCTACTAATGATTTGAGCGACTGGGACTTCCACCCAGCTTCCACAGGACTTCATCATCCCTCTTCCTCTGTGTCCACCTTTCACTCCTTGCCACTGACCCACAGCCATGATGACGCTCATAAGAAGCAGCGCGTTCTACCTCAGAGCCCTTCCACCCCTGATTCTGCAGTTCATTTGATGGATGCAGACAGGACTGAAGGCTCCGCCCACCTTTTACCCTCATGTCCACAGAAAACCCAAGTGGGCGGAGCCAGCTCCCCTGAACACGTCCCCATTCAATCCACTGTTTCCGTGTCTACACGGCAACAGCAGCATGTGAAGACTCATCCCGTTCGCCGCTTGCGGAAAGCAGTGGACAAGAAAAAGACAGTCACTGTTTTGTACAACACCATGTGACCATTACTGAACTTTCATTCGCTGTTTTTGTCAGCGTACAGAACTGTCTCTGACTGCAATTTAGGTTTTGTTCAGTGAAGTCTAAGCTACATTAGTGTGCTACTGAAGGTGTGAGTGAGGTCACGTGTGAGCGAGCGTATGTCAGTTTTCTGTTCAGAAACTTTCAGGTAGCAACTCAAACAAGGGGGTTGTTTCTTAACACATGCACTTTACTCTCTTGttgaacttttttattgttttatgtttcgTCTTTTTAGATagcatttttatttgtgtattttgcaCTGGCTTGAACGGTAGAGTTGACTGTATGTCTGACAGCATGTGGAGTCATGATTCTGTTTGAAACCAAGGTAAACTTGACAACTTTTTTATCCTGTGCTTTAGCTGTGACTATTATAAAATAAACTGCACTATTTTATTGATTCTGTCCGATGCTTTCTATTTCTTAGTCAACAGTACGTCAAATATCATTTAATTAAGTAGGATTATTGGAGATTTTAGGAGACAAGAAAGTTCAGTTTTGATGAATGCTATGAGAGGCATTGgtcatgaagatgatgatgatgattagggattattttatcattcagttactgtacttgaatactgttattatttttgttgtatctTCATTATAATTTTAGATTATGCATGAAAAAACAATACATGCAAATACTGAAATGTACTGCAAATAGACAaattaccagtttgtaaacattcCGGATGTGCGCGCAGCGAGGGTGCAGaaaaaaacgggagcgctagCCTTGACAGTGAGGGAATGACAACCGATgctgtacagagtttgttgttgtattagaaatAAGtcatattgattacatattatatatatatattatttacttaatgctttcagcgtattataacagcttgacACCCAGCGTTAAAGACAGTTATTCCGCAAAATTAACAGTAAAGTGAGccgcgttcgtctgacaggttcATTTGCTATAGCActctcccaatggatattggacaaaacaaaatggccaagcatccagccccaaatatacaactatctcactGAAACTctaagtgattttacaagagagaagttaaaggcttACAAGTCTTTGAATGCCAACAATGTTATTCTGTATGGTCATGTGccagaaataatgttccatgattactagattcaacactatgtagtgctaaaaaccgaggttctgcctagccgaAGACAAGGAAAGAACTGTACAAAGTCTgagtaatcatcaacaagcaacaCAACTggattctgacagcgaactgcacctgtatggcagggtatgtgaTTGTACAGTTTTACAtgtctgcagtttaattcaccattactgtttttgctgaaatcattgctgcaatcaaaaatgagtaacGTGTATGATTCAGCGAagtgtgaacttacctgatataacatgagaactgcatagtccagcatttttaaataggtccttactccattcagctcttataaTGGCTGTTAGCCCAATACATCTGCGgctggcattaaaagcagtgtggtgtacggtaaaattttagttttctatttttggatttTGACTTTctaatttggcatcctaccacacaacactacatgtttgctattgcagccggtctttttttttttttcaaccggTATGCATGGTTGAACCTGTGTGACAtcacgtaggttggtaattcctatATAGAGCAGACCACAACGAAATGTGTCGAAggaccccaaaaagtttattAATAGTTGTAGGCGCAAATATTAAACCTCAATTTATCAATCTCTGACTGAACACATGCATGCAAATACTcacagaaatgctctgcaaataggacagaccacaatgaaaatgtgtcAGGGGAGCACAAAAAGTTTGTAGATGGTTCATTAGATGTTATGGAGATGcattcccactgcagaatcatcccaatccatctgatacacaggtgtcaaactcagttccaaaagggccgcagctctgcacagtttagttccaaccctaattaaacacacctgatcaaactaattgagtccttcaggcttgtttgaaacctataggtaagtgtgttggagcagggttgaaactaaactgtgcagggcttcggccctccaggaattgagtttgacaccccagaTCTAACATCATAATTAGGTCATccggtgaaattgtatttatatcgcaaaataaaaagTATTGCAATACTagattttccaatattgtgcagccctagtagttattattaatattaaatatatattgttattgacTGAatgttatcatcattatcatcctcATCACAGTTTTACTCTGCTCTCTGTTGCTGCATTTTGCTGTGCAGAAAAGCACCACCGAGTGGCCAAGAGCAGTACTGCAGTATGATGTAATGCTTAGTGTCGTGGCTGTTGGGATTGTTTCCTGTGCCCTGGGATCCGTATTTTTAGGCCcttatttatctttattattattatgtattgcCATTGGAAATGTTATATTTCTAACCAAGTTAGTAttgttaaacacaatatattggACTCTCCTGCTTTTAATGGCTGCAGAAGACTTTTTGAAGTGAAATGAACTCACTCAAGGTGAAATTTAAGTGTCGCTAggattttttaaatcatatattaaCATAAACAAGTCTCATctaatttatgtgtttatttgtttaatgaaaaaaaataccatttgttgctgacatggcataaaataaaatatgatataatatgataacCAAGTGAGGGATGCCAATAATGATATCTGGCATTATgtcatgtaaaatgttttaaaaatcttttcagGCTTTCACTAAAAACTAATAGCACCCCTCTGTGTATTTCTGTCCATTTTACTTTCTGTTTTCTGTCTATCTGGCAGTGTTTATTGGAAATCACTCCTTTGATGCATGTAAGACTAAGCAGTCTGTTCTACAGCAGTCCATTTTAACTTCACTAGGGGCCAATGGCTATTATCTTTCAATGCTCCCATCATAGTACCTGAGCCGACGGactcttattaatattattcattggGGTTGACTCATCGCATAGCCAAAGCTTCCTCTAGACTGCTGATTCATACTGGAAACAGCACTGCAATGCTTAAAACACTCCCCCGATAGTCCCAAAATAACACTGGGAGCGAAGGTGTTTTAAGCCTTTTGCAAGTGATTTTGAATCTGCTTGTGGAAAATTTCACATGTAATTATCTGAAGCGATGTACAAAGGCAGTTAATGACAGCTGAATGTCTCAAATATGTGTATCAGttcctcccaaaaaaaaaaaaaaaactgtagagatGAACACGGGAGGTAGAGAAAGTGTTTGTAGAGTCGGTGTTTAATCTTTAACTAGCTGGCAGGTGCAGGTCAAGTAACCCAGCAGTGGCTGGTGGCAGCCGCCAGTGGTTGACTGTCTGATCATGAAGCCTAAGGGGGgtaagagtgctggtgaaatgGATATATAAAAACACGATATTGAGAGAtaatttgatgtgtgtgtgtgtatatgtatatacatatgggcgaagcagtggcgcagtaggtagtgttgtcgcctcacagcaaaaaggtcgctggttcgagtctcggctcagttggcgttttagtgtggagtttgtatgttctccctgtgttcgcgtcggtttcctccgggtgctccggtttccctcacaatccaaagacatgcagtacaggtgaattgggtaggctaaattgtttgtagtgtgtgaatgtgtgtgtggttgtttcccagagatgggttgcggctggaagggcatccgctgtgtaaaaactagctggatgacttgatggttcattccactgtggcgaccccggattaataaagggactaagccgacaagaaaatgaatgaatgaatatatatatatatatatatatatatatatatat
>TCONS_00018268
gttttacagAATAGAAAAGAAGAGAATAAAATACAGGAATAAagtttttgtaatacatttttttataatgcaGGAAAACTCGAACtacatgtaaacaaaacaaaataaagcttGATTGTGTGAAATTACTAAAAAAGGGCTACTTctcttttttgcatttttgttttgttttgtaaagcttttttccctttttaaattgataataaaaaaGTGATGCAAATTATGTGCAATAGTTTCATTAACCTGGCACAAAGAGTATATCTAAGCTATTTGCCTGGCatctataaaacataaaattatcgATTAAAACGTCAATCAAATGGCAAAGAGGAGAGGAATGACGCCTCATCCTAAGCAACTGTTAAGCGCTGTTTAGTGGTTTGACAGCTGGCACGTACAGCGCATGCGCAGAACGAACAAGTCGAAGCTCGAAGACGCGGCTGCACATCTTCCTCTGTGCGACGGCACCAAATGATGTGAGTTTCGCCGCTATCTTCTCTGTCATCTCGCGTTTCTCTACCTTGAATGGCGCTGGTCACCGTACAACGGTCGCCAACCCCGAGTACATCATCCAGTCCGTGCGTGTCGGAGGCAGGCAGTGCTGAAGATGACCGGCGCTCTCAGCCCAGGAGTATCAGCGAGAACTTCCTAACTGTGAAAGGTGCCGCCCTGTTCCTCCCGCGGGGAAATGGCTCCTCCTCTTCTTCAGCACCCCGCATCCCACAGCGGCGCAACAAACACACAGGTGACCTTCAGCAGCATTTGCAGACCATGTTCACCCTGCTGCGTCCAGAGGACACAATTCGCCTGGCTGTCCGGTTAGAAAGTGCTTATGCTGTCCGTACACGGTACATGGTGATCATTTCCACCAATGGTAGACAGGACACCGAAGAAAGTGTGGTGCTGGGAATGGATTTCAGTAACTCAGACCGAACTTGCACTGTCGGGCTGGTTTTACCCTTATGGAGCGATACGCTTATACACTTGGATGGAGACGGTGGCTTCAGCGTGTCCACCGTTAACCGCGTCCATGTCTTCAAACCAGTCTCCGTGCAGGCCATGTGGTCAGCCTTGCAGTCCCTGCATAAGGTTTGCGAGGTTGCCCGATGTCATAACTACTACCCCGGCAGTCTCTTCCTGACCTGGGTTAGTTACTATCAGAGTCGCGTGACCTCCGATCAGCACTGCATCAATGAATGGAACGCAATGCAAGACGTGCAGTCCCACCGTGCAGACTCTCCTGTGCTGTTCACTGATGTGCCAACTGAGAGAGAGCGAACGGAGAGACTGATTAAGACCCGCTTGAGAGAGATCATGATGCAAAAGGACTTGGAGAACGTCACTTCGAAAGAGGGTTCAGAGTGGAATGCCTCTAACCTTGAGGAACTCCAGAACAGCGGGGTTCGCTACATCCTGAATGTGACGCGAGAGATTGATAATTTCTTCCCCGGGCTATTTGAGTACCACAACATACGAGTCTATGACGAGGAGGCCACAAACCTCCTGGAGTATTGGAACGACACCTACAAGTTCATTTCAAAAGCCAAGAAAGCAGGGGTGAAGTGTCTAGTGCACTGTAAGATGGGAGTGAGTCGTTCTGCTTCCACCGTGATTGCTTACGCTATGAAGGAGTATGGCTGGGACCTGGATAGAGCCTTTGACCATGTGAAGGAACGGCGCTCTGTCACCAAACCAAACCCGTCTTTCATGAAGCAGCTGGAAGAGTACCAGGGTATCCTGCTTGCCAGCAAACAGAGGCATAACAAGTTGTGGCGTTCCCACTCAGACACTGACCTCTCGGATGGTCACGAGCCACTGTGCAAGACCCCTCGCTCACTGGACCGCTCAGATCCTCACAACAACAATGGTTCTCTTTCTATCCAGCAGATGCTGGGCATTGCTGTGCTCGAATCCCTTACCAATCCCCGACCTGTTGCATGCAACACCCATAAAAAATCGGGTGAGACACCCTCAAAGCTAGCACATGAGGACCTCTTCCTCCTTCCTCAATCCAGACAACGAGCTGCCACAGTGGGCTCTAAGCAGAGGAACTCCACTTTGATCCTTGCGGTGCGAGAGCCTGTTTCTCACCGTCACCCACCTCCTGCTCTACACGTCCTCGATTCTCCTCTTTTACCAGAGGAGAGAGGAGGAGACACGACTCCAAACCTCGGCGCCCAGTCGTCTCACCAAGTGCCTGAGCCAAAAACAGACTGTGTTGAGTTGTCCCCCGACTTGCCTGATCAAAATGACTCTTATCAAGTGTCACAAAGCTTAGAACTGTGTCTGGAAAGTGCTGTCAGTAAAGATGAAGGGAATCTGCCTTCTTCAAGTACGCCTGAGGCTGACAGCCCTTCGGAAGCCCCTGCTGTACCAGAGCTGGTCTCCAGTGATGATAACAACAACCCTAATGCAGCAGATCTAGAAGCGGCAGACGACTGTACGGATGCCAGCGTGTCTCGCCTCAGCACAGATAGCATTGACTTTTTTAGTGCTAGAGAAAAGTTCCTCTGCCTATCCCAGGACAATCACCCTTGCTCACTTTCTGAAACAACTGCAGTGCAGTCACCTCCGGCCAGATGCACCTCACCCTTGGATCACCCTAGTGAGGAACCTGAGGAGGAGTGCCACACCCATTCAGAGGAGCATAGCGACGCAGTGCTCCAACCCTCTGCTCATGACAGTACTGTGTCTGTGCGTCATATAGTTACTGAACTGGAATCCACATCACAAACCAGCAGTCCGCCACTGGCACACACCTCACCTCAGACTGCAACACcagaggagaaggaggaggaggatgaggaaGCGGCTCCGGCTCCTCATTCTCTCTCCGACAGGCCCTCAGGATCCGTGCGCCGGGTGACTGAGCAGTTGGAGCTTATACTACGTCAGGGTCAAGAGATTCCTCTCTCTCGTTCACCTCTTCCTTCCCCATGTTTGGGCTGCACACAGTCTTACTCTGATGAGCCAGAAGATTCTCCTGCCCTCTCCCAAAAGACTCCACAGGGTAAAGGAGATGACACCAAAGTGCTTGATGATGAGGACTCTGGTATAATCCCCGATCCTTCCTTCTCTGTGTTTCTTGAGGGGAGTGTTTCATTGGAGGCCGACCAGATCACTTTGAACCCCACTCTTGAGCCCAGCTCTTGTTCTTCCTCcctgttgtggctggaaggagtAACTGAGCTGGAGACAGATGTAGATGATCCGTTAAGGCCTCAAGTGCGGCTAGCACGCAGCAGTGAGGATTTGCAGAAAATCCAGGAGACTCTCAGAGAGCTCCAGGCATTTTTATATGAAGCTGGGGGACTGGGAGTTAGCACTGGACAGGTTGAGGAAAACCGGTCGTCTGATGGCAGTGGGGAGCAGCGGTTTGAACCCAAAGCACCAGCGGTGTGGCAGAGAGCCATGGAAATTGAGGCCCGCATCAGACAAGCCGGCCTCACTCCTCCCTCACTCATGAAACGCTCTGCCTCACTTGCTAAATTGGACCGGCTAGAGCTGTCTACTAATGATTTGAGCGACTGGGACTTCCACCCAGCTTCCACAGGACTTCATCATCCCTCTTCCTCTGTGTCCACCTTTCACTCCTTGCCACTGACCCACAGCCATGATGACGCTCATAAGAAGCAGCGCGTTCTACCTCAGAGCCCTTCCACCCCTGATTCTGCAGTTCATTTGATGGATGCAGACAGGACTGAAGGCTCCGCCCACCTTTTACCCTCATGTCCACAGAAAACCCAAGTGGGCGGAGCCAGCTCCCCTGAACACGTCCCCATTCAATCCACTGTTTCCGTGTCTACACGGCAACAGCAGCATGTGAAGACTCATCCCGTTCGCCGCTTGCGGAAAGCAGTGGACAAGAAAAAGACAGTCACTGTTTTGTACAACACCATGTGACCATTACTGAACTTTCATTCGCTGTTTTTGTCAGCGTACAGAACTGTCTCTGACTGCAATTTAGGTTTTGTTCAGTGAAGTCTAAGCTACATTAGTGTGCTACTGAAGGTGTGAGTGAGGTCACGTGTGAGCGAGCGTATGTCAGTTTTCTGTTCAGAAACTTTCAGGTAGCAACTCAAACAAGGGGGTTGTTTCTTAACACATGCACTTTACTCTCTTGttgaacttttttattgttttatgtttcgTCTTTTTAGATagcatttttatttgtgtattttgcaCTGGCTTGAACGGTAGAGTTGACTGTATGTCTGACAGCATGTGGAGTCATGATTCTGTTTGAAACCAAGGTAAACTTGACAACTTTTTTATCCTGTGCTTTAGCTGTGACTATTATAAAATAAACTGCACTATTTTATTGATTCTGTCCGATGCTTTCTATTTCTTAGTCAACAGTACGTCAAATATCATTTAATTAAGTAGGATTATTGGAGATTTTAGGAGACAAGAAAGTTCAGTTTTGATGAATGCTATGAGAGGCATTGgtcatgaagatgatgatgatgattagggattattttatcattcagttactgtacttgaatactgttattatttttgttgtatctTCATTATAATTTTAGATTATGCATGAAAAAACAATACATGCAAATACTGAAATGTACTGCAAATAGACAaattaccagtttgtaaacattcCGGATGTGCGCGCAGCGAGGGTGCAGaaaaaaacgggagcgctagCCTTGACAGTGAGGGAATGACAACCGATgctgtacagagtttgttgttgtattagaaatAAGtcatattgattacatattatatatatatattatttacttaatgctttcagcgtattataacagcttgacACCCAGCGTTAAAGACAGTTATTCCGCAAAATTAACAGTAAAGTGAGccgcgttcgtctgacaggttcATTTGCTATAGCActctcccaatggatattggacaaaacaaaatggccaagcatccagccccaaatatacaactatctcactGAAACTctaagtgattttacaagagagaagttaaaggcttACAAGTCTTTGAATGCCAACAATGTTATTCTGTATGGTCATGTGccagaaataatgttccatgattactagattcaacactatgtagtgctaaaaaccgaggttctgcctagccgaAGACAAGGAAAGAACTGTACAAAGTCTgagtaatcatcaacaagcaacaCAACTggattctgacagcgaactgcacctgtatggcagggtatgtgaTTGTACAGTTTTACAtgtctgcagtttaattcaccattactgtttttgctgaaatcattgctgcaatcaaaaatgagtaacGTGTATGATTCAGCGAagtgtgaacttacctgatataacatgagaactgcatagtccagcatttttaaataggtccttactccattcagctcttataaTGGCTGTTAGCCCAATACATCTGCGgctggcattaaaagcagtgtggtgtacggtaaaattttagttttctatttttggatttTGACTTTctaatttggcatcctaccacacaacactacatgtttgctattgcagccggtctttttttttttttcaaccggTATGCATGGTTGAACCTGTGTGACAtcacgtaggttggtaattcctatATAGAGCAGACCACAACGAAATGTGTCGAAggaccccaaaaagtttattAATAGTTGTAGGCGCAAATATTAAACCTCAATTTATCAATCTCTGACTGAACACATGCATGCAAATACTcacagaaatgctctgcaaataggacagaccacaatgaaaatgtgtcAGGGGAGCACAAAAAGTTTGTAGATGGTTCATTAGATGTTATGGAGATGcattcccactgcagaatcatcccaatccatctgatacacaggtgtcaaactcagttccaaaagggccgcagctctgcacagtttagttccaaccctaattaaacacacctgatcaaactaattgagtccttcaggcttgtttgaaacctataggtaagtgtgttggagcagggttgaaactaaactgtgcagggcttcggccctccaggaattgagtttgacaccccagaTCTAACATCATAATTAGGTCATccggtgaaattgtatttatatcgcaaaataaaaagTATTGCAATACTagattttccaatattgtgcagccctagtagttattattaatattaaatatatattgttattgacTGAatgttatcatcattatcatcctcATCACAGTTTTACTCTGCTCTCTGTTGCTGCATTTTGCTGTGCAGAAAAGCACCACCGAGTGGCCAAGAGCAGTACTGCAGTATGATGTAATGCTTAGTGTCGTGGCTGTTGGGATTGTTTCCTGTGCCCTGGGATCCGTATTTTTAGGCCcttatttatctttattattattatgtattgcCATTGGAAATGTTATATTTCTAACCAAGTTAGTAttgttaaacacaatatattggACTCTCCTGCTTTTAATGGCTGCAGAAGACTTTTTGAAGTGAAATGAACTCACTCAAGGTGAAATTTAAGTGTCGCTAggattttttaaatcatatattaaCATAAACAAGTCTCATctaatttatgtgtttatttgtttaatgaaaaaaaataccatttgttgctgacatggcataaaataaaatatgatataatatgataacCAAGTGAGGGATGCCAATAATGATATCTGGCATTATgtcatgtaaaatgttttaaaaatcttttcagGCTTTCACTAAAAACTAATAGCACCCCTCTGTGTATTTCTGTCCATTTTACTTTCTGTTTTCTGTCTATCTGGCAGTGTTTATTGGAAATCACTCCTTTGATGCATGTAAGACTAAGCAGTCTGTTCTACAGCAGTCCATTTTAACTTCACTAGGGGCCAATGGCTATTATCTTTCAATGCTCCCATCATAGTACCTGAGCCGACGGactcttattaatattattcattggGGTTGACTCATCGCATAGCCAAAGCTTCCTCTAGACTGCTGATTCATACTGGAAACAGCACTGCAATGCTTAAAACACTCCCCCGATAGTCCCAAAATAACACTGGGAGCGAAGGTGTTTTAAGCCTTTTGCAAGTGATTTTGAATCTGCTTGTGGAAAATTTCACATGTAATTATCTGAAGCGATGTACAAAGGCAGTTAATGACAGCTGAATGTCTCAAATATGTGTATCAGttcctcccaaaaaaaaaaaaaaaactgtagagatGAACACGGGAGGTAGAGAAAGTGTTTGTAGAGTCGGTGTTTAATCTTTAACTAGCTGGCAGGTGCAGGTCAAGTAACCCAGCAGTGGCTGGTGGCAGCCGCCAGTGGTTGACTGTCTGATCATGAAGCCTAAGGGGGgtaagagtgctggtgaaatgGATATATAAAAACACGATATTGAGAGAtaatttgatgtgtgtgtgtgtatatgtatatacatatgggcgaagcagtggcgcagtaggtagtgttgtcgcctcacagcaaaaaggtcgctggttcgagtctcggctcagttggcgttttagtgtggagtttgtatgttctccctgtgttcgcgtcggtttcctccgggtgctccggtttccctcacaatccaaagacatgcagtacaggtgaattgggtaggctaaattgtttgtagtgtgtgaatgtgtgtgtggttgtttcccagagatgggttgcggctggaagggcatccgctgtgtaaaaactagctggatgacttgatggttcattccactgtggcgaccccggattaataaagggactaagccgacaagaaaatgaatgaatgaatatatatatatatatatatatatatatatatat
>TCONS_00018269
CCTCATCCTAAGCAACTGTTAAGCGCTGTTTAGTGGTTTGACAGCTGGCACGTACAGCGCATGCGCAGAACGAACAAGTCGAAGCTCGAAGACGCGGCTGCACATCTTCCTCTGTGCGACGGCACCAAATGATGTGAGTTTCGCCGCTATCTTCTCTGTCATCTCGCGTTTCTCTACCTTGAATGGCGCTGGTCACCGTACAACGGTCGCCAACCCCGAGTACATCATCCAGTCCGTGCGTGTCGGAGGCAGGCAGTGCTGAAGATGACCGGCGCTCTCAGCCCAGGAGTATCAGCGAGAACTTCCTAACTGTGAAAGGTGCCGCCCTGTTCCTCCCGCGGGGAAATGGCTCCTCCTCTTCTTCAGCACCCCGCATCCCACAGCGGCGCAACAAACACACAGGTGACCTTCAGCAGCATTTGCAGACCATGTTCACCCTGCTGCGTCCAGAGGACACAATTCGCCTGGCTGTCCGGTTAGAAAGTGCTTATGCTGTCCGTACACGGTACATGGTGATCATTTCCACCAATGGTAGACAGGACACCGAAGAAAGTGTGGTGCTGGGAATGGATTTCAGTAACTCAGACCGAACTTGCACTGTCGGGCTGGTTTTACCCTTATGGAGCGATACGCTTATACACTTGGATGGAGACGGTGGCTTCAGCGTGTCCACCGTTAACCGCGTCCATGTCTTCAAACCAGTCTCCGTGCAGGCCATGTGGTCAGCCTTGCAGTCCCTGCATAAGGTTTGCGAGGTTGCCCGATGTCATAACTACTACCCCGGCAGTCTCTTCCTGACCTGGGTTAGTTACTATCAGAGTCGCGTGACCTCCGATCAGCACTGCATCAATGAATGGAACGCAATGCAAGACGTGCAGTCCCACCGTGCAGACTCTCCTGTGCTGTTCACTGATGTGCCAACTGAGAGAGAGCGAACGGAGAGACTGATTAAGACCCGCTTGAGAGAGATCATGATGCAAAAGGACTTGGAGAACGTCACTTCGAAAGAGATTCGGACTGAGCTAGAAATGCAAATGGTTTGCAACCTGCGAGAGTTCAAGGAGTTCATTGATAATGAGATGATCGTCATTCTGGGCCAGATGGACAGCCCCACTGAGATCTTTGACCATGTTTACCTGGGTTCAGAGTGGAATGCCTCTAACCTTGAGGAACTCCAGAACAGCGGGGTTCGCTACATCCTGAATGTGACGCGAGAGATTGATAATTTCTTCCCCGGGCTATTTGAGTACCACAACATACGAGTCTATGACGAGGAGGCCACAAACCTCCTGGAGTATTGGAACGACACCTACAAGTTCATTTCAAAAGCCAAGAAAGCAGGGGTGAAGTGTCTAGTGCACTGTAAGATGGGAGTGAGTCGTTCTGCTTCCACCGTGATTGCTTACGCTATGAAGGAGTATGGCTGGGACCTGGATAGAGCCTTTGACCATGTGAAGGAACGGCGCTCTGTCACCAAACCAAACCCGTCTTTCATGAAGCAGCTGGAAGAGTACCAGGGTATCCTGCTTGCCAGCAAACAGAGGCATAACAAGTTGTGGCGTTCCCACTCAGACACTGACCTCTCGGATGGTCACGAGCCACTGTGCAAGACCCCTCGCTCACTGGACCGCTCAGATCCTCACAACAACAATGGTTCTCTTTCTATCCAGCAGATGCTGGGCATTGCTGTGCTCGAATCCCTTACCAATCCCCGACCTGTTGCATGCAACACCCATAAAAAATCGGGTGAGACACCCTCAAAGCTAGCACATGAGGACCTCTTCCTCCTTCCTCAATCCAGACAACGAGCTGCCACAGTGGGCTCTAAGCAGAGGAACTCCACTTTGATCCTTGCGGTGCGAGAGCCTGTTTCTCACCGTCACCCACCTCCTGCTCTACACGTCCTCGATTCTCCTCTTTTACCAGAGGAGAGAGGAGGAGACACGACTCCAAACCTCGGCGCCCAGTCGTCTCACCAAGTGCCTGAGCCAAAAACAGACTGTGTTGAGTTGTCCCCCGACTTGCCTGATCAAAATGACTCTTATCAAGTGTCACAAAGCTTAGAACTGTGTCTGGAAAGTGCTGTCAGTAAAGATGAAGGGAATCTGCCTTCTTCAAGTACGCCTGAGGCTGACAGCCCTTCGGAAGCCCCTGCTGTACCAGAGCTGGTCTCCAGTGATGATAACAACAACCCTAATGCAGCAGATCTAGAAGCGGCAGACGACTGTACGGATGCCAGCGTGTCTCGCCTCAGCACAGATAGCATTGACTTTTTTAGTGCTAGAGAAAAGTTCCTCTGCCTATCCCAGGACAATCACCCTTGCTCACTTTCTGAAACAACTGCAGTGCAGTCACCTCCGGCCAGATGCACCTCACCCTTGGATCACCCTAGTGAGGAACCTGAGGAGGAGTGCCACACCCATTCAGAGGAGCATAGCGACGCAGTGCTCCAACCCTCTGCTCATGACAGTACTGTGTCTGTGCGTCATATAGTTACTGAACTGGAATCCACATCACAAACCAGCAGTCCGCCACTGGCACACACCTCACCTCAGACTGCAACACcagaggagaaggaggaggaggatgaggaaGCGGCTCCGGCTCCTCATTCTCTCTCCGACAGGCCCTCAGGATCCGTGCGCCGGGTGACTGAGCAGTTGGAGCTTATACTACGTCAGGGTCAAGAGATTCCTCTCTCTCGTTCACCTCTTCCTTCCCCATGTTTGGGCTGCACACAGTCTTACTCTGATGAGCCAGAAGATTCTCCTGCCCTCTCCCAAAAGACTCCACAGGGTAAAGGAGATGACACCAAAGTGCTTGATGATGAGGACTCTGGTATAATCCCCGATCCTTCCTTCTCTGTGTTTCTTGAGGGGAGTGTTTCATTGGAGGCCGACCAGATCACTTTGAACCCCACTCTTGAGCCCAGCTCTTGTTCTTCCTCcctgttgtggctggaaggagtAACTGAGCTGGAGACAGATGTAGATGATCCGTTAAGGCCTCAAGTGCGGCTAGCACGCAGCAGTGAGGATTTGCAGAAAATCCAGGAGACTCTCAGAGAGCTCCAGGCATTTTTATATGAAGCTGGGGGACTGGGAGTTAGCACTGGACAGGTTGAGGAAAACCGGTCGTCTGATGGCAGTGGGGAGCAGCGGTTTGAACCCAAAGCACCAGCGGTGTGGCAGAGAGCCATGGAAATTGAGGCCCGCATCAGACAAGCCGGCCTCACTCCTCCCTCACTCATGAAACGCTCTGCCTCACTTGCTAAATTGGACCGGCTAGAGCTGTCTACTAATGATTTGAGCGACTGGGACTTCCACCCAGCTTCCACAGGACTTCATCATCCCTCTTCCTCTGTGTCCACCTTTCACTCCTTGCCACTGACCCACAGCCATGATGACGCTCATAAGAAGCAGCGCGTTCTACCTCAGAGCCCTTCCACCCCTGATTCTGCAGTTCATTTGATGGATGCAGACAGGACTGAAGGCTCCGCCCACCTTTTACCCTCATGTCCACAGAAAACCCAAGTGGGCGGAGCCAGCTCCCCTGAACACGTCCCCATTCAATCCACTGTTTCCGTGTCTACACGGCAACAGCAGCATGTGAAGACTCATCCCGTTCGCCGCTTGCGGAAAGCAGTGGACAAGAAAAAGACAGTCACTGTTTTGTACAACACCATGTGACCATTACTGAACTTTCATTCGCTGTTTTTGTCAGCGTACAGAACTGTCTCTGACTGCAATTTAGGTTTTGTTCAGTGAAGTCTAAGCTACATTAGTGTGCTACTGAAGGTGTGAGTGAGGTCACGTGTGAGCGAGCGTATGTCAGTTTTCTGTTCAGAAACTTTCAGGTAGCAACTCAAACAAGGGGGTTGTTTCTTAACACATGCACTTTACTCTCTTGttgaacttttttattgttttatgtttcgTCTTTTTAGATagcatttttatttgtgtattttgcaCTGGCTTGAACGGTAGAGTTGACTGTATGTCTGACAGCATGTGGAGTCATGATTCTGTTTGAAACCAAGGTAAACTTGACAACTTTTTTATCCTGTGCTTTAGCTGTGACTATTATAAAATAAACTGCACTATTTTATTGA

Function

symbol description
ssh2a Predicted to enable actin binding activity and phosphoprotein phosphatase activity. Predicted to be involved in actin cytoskeleton organization and negative regulation of actin filament polymerization. Predicted to act upstream of or within protein dephosphorylation. Predicted to be active in cytoplasm. Orthologous to human SSH2 (slingshot protein phosphatase 2).

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0030837 negative regulation of actin filament polymerization biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0016311 dephosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0016791 phosphatase activity molecular_function
GO:0003779 actin binding molecular_function
GO:0004721 phosphoprotein phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-3810 Predicted to enable actin binding activity and phosphoprotein phosphatase activity. Predicted to be involved in actin cytoskeleton organization and negative regulation of actin filament polymerization. Predicted to act upstream of or within protein dephosphorylation. Predicted to be active in cytoplasm. Orthologous to human SSH2 (slingshot protein phosphatase 2).

Ensembl:

ensembl_id ENSDARG00000088440

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018267 False 8257 mRNA 0.45 14 28545143 28569786
TCONS_00018268 False 7813 mRNA 0.44 14 28545143 28587490
TCONS_00018269 True 4114 mRNA 0.51 15 28548628 28587147

Neighbor

gene id symbol gene type direction distance location
XLOC_009294 NA coding downstream 3377 28500046 ~ 28541766 (-)
XLOC_009293 git1 coding downstream 64567 28431621 ~ 28480576 (-)
XLOC_009292 CR478288.2 coding downstream 169516 28375513 ~ 28375627 (-)
XLOC_009291 CR478288.1 coding downstream 187271 28356845 ~ 28357872 (-)
XLOC_009290 prpf8 coding downstream 282434 28248052 ~ 28262709 (-)
XLOC_009296 NA coding upstream 7053 28594543 ~ 28596509 (-)
XLOC_009297 slc6a4a coding upstream 21535 28609025 ~ 28618502 (-)
XLOC_009298 blmh coding upstream 47090 28634580 ~ 28805493 (-)
XLOC_009299 BX950186.1 coding upstream 147437 28734927 ~ 28735041 (-)
XLOC_009300 NA coding upstream 170965 28758455 ~ 28772574 (-)
XLOC_009284 NA non-coding downstream 530015 28010730 ~ 28015128 (-)
XLOC_009280 NA non-coding downstream 588981 27784550 ~ 27956162 (-)
XLOC_009303 NA non-coding upstream 417554 29005044 ~ 29009059 (-)
XLOC_009312 NA non-coding upstream 948994 29536484 ~ 29539166 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000072_04992647_05006768 SSH2A coding CI01000072 null 4992218 ~ 5006768 (-)