XLOC_009310 (BX324227.3)


Basic Information

Item Value
gene id XLOC_009310
gene name BX324227.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 29503472 ~ 29510074 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018306
ATATCCGATCTTGATAGAGTTTTAGAGGAGGGGGATGCTTTGTATGTCAGCACTAAAATGCAGCTTATCGCTGAAAGAAGATTCCGTCAGAACCATCTATCTATGGAGGAAGTACCTTCTAAACTTACAACATTTAACCAAACATACAATGTCCACAAGTCTGAAGTCAAACTTGGATTTCTTCGAGCCAGAAGTGCCCCTGATATGGAAAATTGGTTTTTGCCTCTTGCCAAAAGACTGCAGTGTCTCACAGCAGATGTCACTCACGCACTTTTAATAGTTTCTCGACAATGTATTGCAGTGTTTAGAGATGGATCAGGCAGATATGGATTCTTTGATCCACATTCAAGGACTGCAAAAGGATTACCTGATTGTACTGGTTGTGGAACTGCTGTGATGTTAACTTTTCCCCTACTAAGTGACATGACTGACCAAATTCTGCAGCTTTTTGGGAAATGCCCTGATAATGAAAACTATGAATTCATGCCGGTCTCTTTTGAAACAGAGCAACAGGCTGGCCAACAGCCTTTACTCTCAACTTGTGCTCAATTTTCACAAGTAATTTCAGTTCTACCTGAACCAGAAGAAAATATTGACGTCCAAAATGGTATAGCCCAAGAAAACAAAGCCATGATGTCCAAAAAAAATAAGTCCAGAAGAAGAAGAGAAATGCgaaaaacaactgaaaaattCAAATCTAGAAAATCCAAGAACACCACTGCATCCTATGCaatgaaaaaacacaaacaaagagaTAATGAAAGGGACCGGTATGCCGCCTGTTTACAGTTTCGGACAAACAAAAAAGAAGCTGTTAGGGAAAAGTACAGCCAGGATGCTCATTttagaaacaaaaagaaagacTGCAGTAATAGACGGTACAAAGATGAGATTGTTCTGTCAAAGAAGAAAGAATACATGGCTAGGAGGTATACCACAGATCCAGTTGTACAGTCAAAGAAGAAGGAATACATGGCTAAGAGGTATACCACAGATCCAGTTGTAAAGTCAAAGAAGAAAGAATACATGACTAGGAGGTACAGTTACGACACCATCTTCCAGGCAAAAAAAAGAGCACACATGGTCAGCAGGTACAGTACTGATACTGCTTTCCAGAAAAAAATGAAGGAATACATGATGAGGAGATATGGAAATGATTCTgagttcagagcacatcacattCTCCAATGTACCCTCCATAAGAAACAGAAGCTTCCTAATAACACTACACGTATTCATCAGTTGCAATGTGCACTGAGGATTAAAAGGAAATACAAGATGTGCATCCGCTCCAGCTTGGAAACACCCCAGCCTTTGGTCAGTAAAGTGATGGAAAGTGCAATTCATGCATTCCGGTCTAAAATCCAGCAAGGTCCTACATACGTCTGCACAGTCTGCCACAGAGTCCTCTTTCCAGACCAAGTCAAGGCCTGTGATGGATCGAATTATGAAAAAGATGTTCAACTTTCATCATTTTGCTTGACAAGGAAGTATGTGCATACTTGCGACAGTGTCTGCTCAGATGATTGCACCGTTCCAGAAGAGAGAAGACGTGAATGGATCTGCCACACATGTGACAGCCATCTGAAAAGAGGACGCATGCCTTCAATTGCAGCAGTAAACAAGCTTGAACTGCCACCTATCCCTGCAGAATTGGCTGAGCTAAATGTGCTGGAACGTCAGCTTATTGCAAAAATTTTACCTTTCGCAAAAATAGTTGCACTGCCCAAAGGACAACAGAGAGCAGTTCAcggtgctgttgtgtgtgtgccttCGGAGGTGGAGAACACTGTCAACTCTCTGCCAAGACCAAGAAGCGAGTCCCAGCTCCTACAAGTCAAGCTAAAGAGACATGTCAGTTTTAAAGGATACCAGCACTTCCATACTGTAAATATGCACAGCGTACTGGCAGCTTTATCCAAGCTGAAGGAAGTGCATTCTGAGTACAAGGATATCTCCATACAAGAGCCTGAGGTATCTGAAGATCAGTTTGACGAAGACATTGATGCAGCAGAGGATAACCAAGAAGTTGGCACTGCTGAGCACGAGGAGCAACATGTCAGTGTGGAGGAAAAGGATGAACTTCGCCCCGGTCTTACATTGGACACGTGCATGCAGCCACCAGACATTGCACATGACATCTTGTCGTACGGTGAAGGGATCTTTAGTATCGCACCTGCACAAGGAAAGAAGCCTGTTGGATTTTTTAAAATCCCAAAACTGGAAGCCATGGCATTCCCTGTCCAGTTCCCCACAGGAGAGAACACAATCGACGAGGCAAGGCAGACAGCAGTTTCTCCTAGCATGTACTTCAACGTCAGATTGTTTTGTGTTGATGCCCGATTTGCAAGGGATCAAAGCTACCTTTTCTTTGCACAATTTGTGACAGAAACGCAACTGGCAAGAAACAGCATGTCCATTCAACTTCGAAAAGGTAAACCCATTACTAAAGATGGCCGAAGAATCTCCAATAGGATGCTTCAGGATTCCGATGAGGTTGAGAGACTTGTTCACAACAGGGATGCCACACGATTCATGCAGCCCCTGAGAGGCTCTCCAGCCTATTGGGAGAAGACGTTGCGAGATCTACAGGCCATGATTCGACAGCTGGGGACACCTACTTTCTTTTGTACATTCAGTGCAGCAGAAATGCGATGGCCTGAGATTGTGACTGTAATCAAAGCTCAACAAGGCGAAGAAATTGACTTTTCACAGCTTGACTGGGCGACAAAATGTGAAATCCTTAGGAGTAATCCTGTCACTGTCATGCGCATGTTTGAGAAGCGTGTAGATGCATTAATGGCTCACCTGCTTTTGTCACCTGCACAACCCATTGGTGAAGTGGAGGATTTCTTTTATAGAGTGGAGTTTCAGGCAAGAGGAAGCCCACATATTCATCTGCTTGCTTGGGTAAAGGATGCCCCAGATCCAGAGGAAGACAATGATGAGACAATATGTGACTTCATCGACCGTTACGTATCTTGCAAGCTTCCAGATCCCAATGTTGATCCTGAGCTTCATAAGATTGTGACAGAGGTTCAGCTTCATAGCAAAAACCACTCAAAGTCATGCAAGAAAGGCAAGGTGGTGTGTAGATTTGGATTTCCAAAACTACCAATGCCTAAGACCATGATCACTCATCCGATGCCAGAGCGTCCTGATGAGGGGGATGATGAACCGACTGACTCAGCAGCCAAGAAAAAAGCAAGGCGAGATGAGGCTAAAAAAGCAATGAATGAAGCCAAATCAAAACTCAAGCCTTTGTGGGATTTGCTGAATGATCCCAAATCTTCCTTCAACAATTTGTCAGACCTTCTAACCAAGTGCAATTTGTCCATGGACGATTACCTGAACTATGCTGAAGGACTCACCACTGGCAGTGCAGTTCTTTTGAAGCGTGATCCAAAGGAGACTTGGGTGAATGGCTACAATCCTGATTTGCTCAGGGCGTGGAATGCGAACATGGATATTCAGTACATCCTAGACGCTTACAGCTGCATCATGTATATGCTGTCCTACGTTTCAAAGCCGGAGCATGAAATGAGTGGCTTTCTTAAGAACGTTATCCAAAGTGTTCGTGAAGCCAACGTTAATGAAGAGGATGAAATGAAGCACATAATGCAAGCCTATGCCAAGCACCGGCAAGTAAGTGCTCAGGAGTCTGTGGCGCGAACATGCAGCTTGCCGTTGAAGAAGTGTTCACGAAGTGTCGTGTTTGTTCCGACGGATGACGATGCCCTCAAGATGAGTCTGCCCATAAGTGTGTTGCTGAACAAAAATCCTGAATCGGAGGACGTCTGGATGTCAGGTTTAATAGAAAAATATAGAGCAAGACCTCTAACGTTGGAGTTTGAAAAAATGTGTCTTGCAGACTTTGCATCCAATTACCGTGTTGTGTACGGTCAACAAATTAAAGGAAAAAATGTCCTCCGACTGCTTCACGATATGGGATTTATTCAAAAGAGGACTATCGGCAAGCCTGCAGTTATCAGATATGCTCGCTTTTCAGAGGAGAAGCAACCAGAAAAATTTTATGGAAGAATGGTGAAACTTTACGTTCCCCATCGCCACAATGAAGAGCTAAAACCTGAGGATTTTCCCACATATCAGCTATTTTATAAAAGCGGATTTGTGGAACTTCCTGGACATCCTGGTCTCCGGTTCCCTGTCTGCGGCATAGTAAAGGCATACCAGCAGAGATATGAAAAGCATGGCAAAGTTGTAGATAAAGCATTTGAACAACTTCAGCAGGAAGGACCATCTGAGAGTGCTTGGACAGCTTTTGCACCAGAAGTTGAAGTGGATCGCCTGGAATGCATAGCTGAACAAGAAGACGTCGGTCCAGAGGAAGATGACGAACAGGATGAGGTCCCTGAATTCCAGCCTCGTAATGAAGATGGCGACGGAGTTGCACCGCGCATAGTGGCGCCACAGATGAGTGTCGAGTTTGTCAGGAAGCTCTTTAGGAGTTTAAACAAGACACAGGCAGCCATATTTTACACCATTCGGCGGTGGTGTCAGAACCGTGTGTGGGGACTGAATCCAGAACAGTTTTTTTACTTCGTGTCAGGTGGTGCTGGATGTGGAAAGTCGCACGTAATCAAGTGCGTATACACTGAAGCAACGAAGATTCTGCAACAACTTCCTCAGCTCCGGGAGGATGGGGATCTCTCCATTCCTACAGTGATTTTAAGTGCATTCACTGGAACAGCAGCGTTTAACATTTCTGGAAAAACTCTGCATTCCATTCTAAAGCTGCCAAGGAACTTGAAGCCACCCTATCAAGGACTTGGGAACTCTCTTGATGATGTACGAGCAGGATTACGTCACGTGGAAATCCTGATTATTGACGAAATCTCTATGATTTCAAAAGACTTTTTTGCATACATCAACTGGAGGTTTCAACAGATCAGAGGCAGCAAGAAACCATTTGGGGGCATTTCTGTCATCGTGGTGGGAGACTTTTATCAATTACCGCCCCCGGGAAAAGCCAAGCCACTCTGTGTTTACGAAGAGGATGTGCTGGACTTTTGGAAGGACCACTTCCAAATCGTAACCCTCACAGAGATCATGCGGCAGAAAGAGGACCTTGCATTTGCCCAGCTTTTAAACCGATTGAGAGTGAAACGGAAATCTGATGCTCTTAAAGAAGAAGATAGAGCTTTGTTATTGCAAGCTGTGAGGAATCCCCAAGACTGCCCACGTGATGCATTGCACATATTTGCAACCAACAAGGAAGTCCACAGTCACAATAGTAACACGGTAAATGCTCTTCATGCTGACATCATAACCATTCATGCTGAAGATTACCGGAAAGACCCAAGAACAGGTGGGATGAAAAGACAGACTAAACCTGTCATGGGTAATAAAGACGACCTGCTTGACACCATACAAGTTGCAGTGGGAGTCCGCATAATGATGATAAGGAATCTGGATGTCGAAGATGGACTCGTCAATGGATGCTTTGGGAACATTGGAAACATTGTGACTAAAACAAGAGACGGAATTGCATTTGTGCACATGCTTGGCATTCAGCCCGACAATCCAAATGCTGGCCAGAAATACAGACGACGACTGCAAGGTGATCAGGACACTTTAGTCTACATTGAAAGATCTGAGGAACCTGTAAAGAAAAGAGCAGTCCGTCGACAATTTCCAATCAAGTTGGCCTACGCATGCACTGCTCACAAAGTTCAAGGCATGACCATGCAATCGGCTGTAGTATCACTAAAGAGGATTTTTGAGCCAGGAATGGCCTATGTTGCCCTCAGCCGAACAACCTCACTTGGTGGGTTGTACATCAGAGACTTTGATGAAAAAAAGATCTATGCTGATCCGGAAATCACAACCTCGTTGGAGAGGATGAAAACGGCAACGCTGGAAGGCATCATGCCACTTTTTGACTGGAAGAAAACCAACACCAGTCTGGTAGAAAAACTAATTGTTGTGCATCATAACACAGAGGGACTCCAATCACATATAGAAGACATCAAACACCATCATGAGCTGCTTCTATGTGATATCTTTTGTGTTACGGAAACGCACCTCTCCGGATCATGCATCTCATCACATGTCCAGTTGGAAGGCTTTAAGATGTTTGCAAGAAATAGACATGCGTCTTACTCAACCCTTCCAGAAATGGCAAAGAAGGACTGTGGTGGAGTTGCAATTTATTGCAAAGAGGACATTCAGGCGGAACCTCGACACTTTATACACCACGTCACCGACCTGGAGTTTGTCGTCATCAAAGTTGATGCACCAGTGACTGCAACAATTGCTGCGGTGTACAGGCCACCAGACTATAGTCTGGAAAAATTTTTGCCAAACATCAGGGGCCTTCTTGATTATTTGGAAATGATGAAGGAGAATCCCATAATTGTCTGTGGAGACTTCAACGAAGACCACCTCTCGTCTGGAAGAAAGCCCATTCTGGAGTTGTTCCAATCCCAACAATACCAACAGCTCATCACCAATGCAACCACAGAGAAACAAACACTGTTGGATCATATTTATGTTTCTCATCCAGACTTGTGCATGCAGTCAGGTGTTTTACACACCTACTATAGCTATCACAATCCAGTGTATTGTGTTTTGCCTAAATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110949

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018306 True 6603 mRNA 0.44 1 29503472 29510074

Neighbor

gene id symbol gene type direction distance location
XLOC_009309 serpinh1b coding downstream 115460 29382454 ~ 29388012 (-)
XLOC_009308 tsku coding downstream 149452 29343280 ~ 29354020 (-)
XLOC_009307 si:dkey-52l18.4 coding downstream 177218 29322203 ~ 29326254 (-)
XLOC_009306 xaf1 coding downstream 341211 29154547 ~ 29162261 (-)
XLOC_009305 zgc:162698 coding downstream 389005 29092527 ~ 29114467 (-)
XLOC_009311 BX324227.2 coding upstream 17346 29527420 ~ 29534022 (-)
XLOC_009312 NA coding upstream 26410 29536484 ~ 29539166 (-)
XLOC_009313 hspa13 coding upstream 39041 29549115 ~ 29556757 (-)
XLOC_009314 samsn1a coding upstream 54290 29564364 ~ 29586747 (-)
XLOC_009315 si:ch211-207n23.2 coding upstream 83473 29593547 ~ 29598679 (-)
XLOC_009303 NA non-coding downstream 494413 29005044 ~ 29009059 (-)
XLOC_009300 NA non-coding downstream 730898 28758455 ~ 28772574 (-)
XLOC_009299 BX950186.1 non-coding downstream 768431 28734927 ~ 28735041 (-)
XLOC_009296 NA non-coding downstream 906963 28594543 ~ 28596509 (-)
XLOC_009294 NA non-coding downstream 961706 28500046 ~ 28541766 (-)
XLOC_009316 CR388369.1 non-coding upstream 139441 29649515 ~ 29665812 (-)
XLOC_009317 CR388369.1 non-coding upstream 141948 29652022 ~ 29667209 (-)
XLOC_009318 CR388369.2 non-coding upstream 160118 29670192 ~ 29670306 (-)
XLOC_009319 NA non-coding upstream 199225 29709299 ~ 29714528 (-)

Expression


Co-expression Network