Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_009334 |
| gene name | lgals9l4 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 31022014 ~ 31027112 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| lgals9l4 | Predicted to enable carbohydrate binding activity and galactoside binding activity. Predicted to be involved in negative regulation of CD4-positive, alpha-beta T cell proliferation; negative regulation of interferon-gamma production; and positive regulation of gene expression. Predicted to be active in cytosol and nucleus. Orthologous to human LGALS9 (galectin 9); LGALS9B (galectin 9B); and LGALS9C (galectin 9C). |
| id | name | namespace |
|---|---|---|
| GO:0010628 | positive regulation of gene expression | biological_process |
| GO:0010629 | negative regulation of gene expression | biological_process |
| GO:0032689 | negative regulation of interferon-gamma production | biological_process |
| GO:2000562 | negative regulation of CD4-positive, alpha-beta T cell proliferation | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0030246 | carbohydrate binding | molecular_function |
| GO:0016936 | galactoside binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-060312-19 | Predicted to enable carbohydrate binding activity and galactoside binding activity. Predicted to be involved in negative regulation of CD4-positive, alpha-beta T cell proliferation; negative regulation of interferon-gamma production; and positive regulation of gene expression. Predicted to be active in cytosol and nucleus. Orthologous to human LGALS9 (galectin 9); LGALS9B (galectin 9B); and LGALS9C (galectin 9C). |
| ensembl_id | ENSDARG00000069058 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00018352 | True | 1065 | mRNA | 0.42 | 7 | 31022014 | 31027112 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_009333 | AL928870.1 | coding | downstream | 9302 | 31005981 ~ 31012712 (-) |
| XLOC_009332 | lgals9l6 | coding | downstream | 21708 | 30987414 ~ 31000306 (-) |
| XLOC_009329 | nf1a | coding | downstream | 37210 | 30861647 ~ 30984804 (-) |
| XLOC_009331 | NA | coding | downstream | 97925 | 30923150 ~ 30924089 (-) |
| XLOC_009330 | NA | coding | downstream | 106753 | 30911402 ~ 30915261 (-) |
| XLOC_009335 | lgals9l1 | coding | upstream | 5143 | 31032255 ~ 31043183 (-) |
| XLOC_009336 | lgals9l3 | coding | upstream | 27088 | 31054200 ~ 31067589 (-) |
| XLOC_009337 | ksr1b | coding | upstream | 43491 | 31070603 ~ 31147322 (-) |
| XLOC_009338 | wsb1 | coding | upstream | 134671 | 31161783 ~ 31177324 (-) |
| XLOC_009339 | cuedc1b | coding | upstream | 160904 | 31188016 ~ 31237473 (-) |
| XLOC_009326 | NA | non-coding | downstream | 660600 | 30359330 ~ 30361414 (-) |
| XLOC_009325 | NA | non-coding | downstream | 699800 | 30316728 ~ 30322214 (-) |
| XLOC_009342 | AL928851.2 | non-coding | upstream | 272451 | 31299563 ~ 31299678 (-) |
| XLOC_009344 | AL928851.1 | non-coding | upstream | 288097 | 31315209 ~ 31315548 (-) |
| XLOC_009348 | AL845428.2 | non-coding | upstream | 334675 | 31361787 ~ 31362141 (-) |
| XLOC_009360 | AL929092.1 | non-coding | upstream | 520622 | 31547734 ~ 31547852 (-) |
| XLOC_009362 | CR388091.1 | non-coding | upstream | 1036180 | 32063292 ~ 32063409 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
