XLOC_009347 (or111-2)


Basic Information

Item Value
gene id XLOC_009347
gene name or111-2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 31331356 ~ 31366742 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018375
atattaaatattgcaataatatattttataTCTGTAATTGGGAACTCTGTAGTTCTTCTCATTATAGCTCTTGAGAGGAATCTGCACAGTGCAAAGTACATTGGTGTGTTTAACTTGGCCTTGGCTGATATTGGTGAAACTAGTGCTCTGATTCCTAACATGATGAAGAATTTTCTGTTTGACTCTCAGTACATCTCCTATAATGGTTGCATGGCAAATATGTTTTTTGTGTTCCTCTTTAGTTCCATGCAAAGTTTCACTCTTGTTGTTATGGCATATGATCGTTTAATTGCAATTTGTTTGCCGCTAAGATATCATGCTATTGTCAATAATACCAGTATGATTTTAATGACTTTAGCAATTTGGGCATTTAATACTTTTGTGGTGGCCTTGATGGTGTCTTTGATCAACCGACTTTCATTCTGTGAATCCAATATGATACAGAGTTATTTTTGTGATCACGGGCCAGTTTTTAGGTTGGCTTGTAATGACAATAGCATGAATAAGATTATGGCATATGTCATTTCAGTTCTGTACATTTTAGCACCAATGGTCGTTATCGTCTTTTCATATCTGGCCATTTTTCTTGCTTTAATCAAAATCACAACTTGGGAAGGACGATTAAAAGCACTGAAGACCTGTGTGTCTCACCTGTTGTTAGTGGGAATATTTTTCCTCCCTGTATGCTGCACATACATTGCACAaaaaatatttgtagtccAGGGTGTCAATTTCTTGACCGGAGGCTGCACAGTGCAAAATGCAATTCCACCAATGCTAAATcctattatttatgttttaaacacAGGTGAAAacaaaaacaacatggtAAAATTTTTTAACCAGGCCAAGATATCATGCAAAATCATCAAAACCAAGGTTGGTGCACTTCATCAG
>TCONS_00018376
AAAGATCTCGGTGGCATGCTTGAATAAGGACAAACGTTTATGCGGTATTGGTTCCGTCGAGTTTACAAGACAGTCACTGTCATTGCTGGCTCTAAAACTTTGGAGTTATTCAAATATTATGCAAAGTTATTTTAAAAGatttttcaaaACACAAGACGCAAAGCTGCCATGAGTTCTGTAAATGCAAGTTTTTCCAAGAATATCTCCATCGTTCATCCTGAATACTTTTTCGTCATTGGGCTCACAGGTATAGGGTACAGCAGTTATTACTATATATTCTTATTCATCACGTATTTCATAACTGTAGTTGGGAATACTGCAGTCATTCTCATTATAGTTCTTGACCGGAGGCTGCACAGTGCAAAGTACATTGGTATGTTTAACTTGGCCTTGGCTGACTTTGGGGAAGCTAACGCACTGATTCCTAACATGATGAAGACTTTTCTGTTTGACTCTCAGTACATCTACTACAATGCTTGTATGGCAAATATGTTTTTTGTGTTCCTCTTTAGTACTATGCAAAGTTTCACTCTTGTTGTTATGGCGTATGATCGTTTAATTGCAATTTGTTTGCCATTGAGATATCATAGCATTGTCAATAATTCCAATATGATTTTAATTTTCTCAGCAATATGGGCTTTTAATTCTTCTGTGGTGGCCTTGATGGTGTCTTTGATTGACCGACTTTCATTCTGTGAATCTAATATGATACAGAGTTATTTTTGTGATCATGGACCAGTGTATAGGTTGGCATGCAGTGACATTAGCAAAAATAAGATTATGGCGTATGTCATTTCAGCTATGTACATTATAGCACCAATGGTCGTTATTGTCTTTTCATATCTGGGCATTTTTCTTGCTTTAATCAAAATCACAACTTGGGAAGGACGATTAAAAGCACTGAAGACCTGTGTGTCTCACCTGTTGTTAGTAGGAATTTTTTTCCTCCCCTTATTCTGCACATACCTTGCCCAGCTCTTGCTTTCACTGAATCCTAATGCCAGAGTCATCAGCACATCTCTGTCATATGCAATTCCACCAATGCTAAATcctattatttatgttttaaacacAGGTGAAATTAAGGACCTAATTCGAAAAATGCTTAAAAGCAGATCTGCACCGATCAGAGAGAACATTTCCAAATGAGGCTGtaaaatttttcattatttaattggGTCTGTTTGACGCTAGAAAAGTTTGTTAATTATATATCCTCATAATCAATTCAAATTCTCAAAGAAATATAATATATGAAACTGTTCTGTGACCTTTATTAATCAAGCTGGTTTGCTTTTGTTCTATTGATATTGTGACAGTAAATGAAGAAGTAAAAAACGTGATTTAAGTGACCAATCATTGCCATAGTATGTTGACATATTTTATACAACCTTAAACACATCATTCACTGTGATTTACTTGTATTTTTGGTTGATAAAATCAACTTAaaagtgtgattaaaataaatattatttcaaaatgtttttctttttttccataagCTAATGTTATAATGAGCATGTTGGTCTCCACATTTCCCATTCTTCTCTGTATAGTATACATAACATGAAAGCATAATACACACAAATGTAAGTTTCCATTTATTGTGTCTGTTTTTAAAGGTCATCAAAGGTCATAATGACCTCTTTGATACTGAAAGGTAATAACACACATCAATGTAAAGTCTCAGCCTCATAATGGTCTTTTACTGCCCTCTACTGGTATCTTCAAGTAGGTGCATAATGTTTGAGTCTATGTATCTTAACCCAGACAGTgtcatataattattatttcttcaaaatgtctttaaatttgGAAACCAATGTTTATCCTGAAATATGCTTGTTGGTGTAACTTTAATATGTTTAACTCTAAAATTTTGTAAGAATATAACTGTTGTAAAAATAAAAGTCTTCTAATCTTTA
>TCONS_00018377
AAAAAATAACTACATGATATTCCAATATTATGCAAAGTTACAGAAAGcttgCTCGAAACAACAAAAGCAAATCTGCAATGAGTTCTGTAAATGCAAGTTTTTCCCAGAATATCTCCATTGTTCATCCTGAGAACTTTTTCATCATTGGACTTACGGGTATACAGCACAGTGgttattactatatatttttatttttcacatattttataTCTGTAATTGGGAACTCTGTAGTTCTTCTCATTATAGCTCTTGAGAGGAATCTGCACAGTGCAAAGTACATTGGTGTGTTTAACTTGGCCTTGGCTGATATTGGTGAAACTAGTGCTCTGATTCCTAACATGATGAAGAATTTTCTGTTTGACTCTCAGTACATCTCCTATAATGGTTGCATGGCAAATATGTTTTTTGTGTTCCTCTTTAGTTCCATGCAAAGTTTCACTCTTGTTGTTATGGCATATGATCGTTTAATTGCAATTTGTTTGCCGCTAAGATATCATGCTATTGTCAATAATACCAGTATGATTTTAATGACTTTAGCAATTTGGGCATTTAATACTTTTGTGGTGGCCTTGATGGTGTCTTTGATCAACCGACTTTCATTCTGTGAATCCAATATGATACAGAGTTATTTTTGTGATCACGGGCCAGTTTTTAGGTTGGCTTGTAATGACAATAGCATGAATAAGATTATGGCATATGTCATTTCAGTTCTGTACATTTTAGCACCAATGGTCGTTATCGTCTTTTCATATCTGGCCATTTTTCTTGCTTTAATCAAAATCACAACTTGGGAAGGACGATTAAAAGCACTGAAGACCTGTGTGTCTCACCTGTTGTTAGTGGGAATATTTTTCCTCCCTGTATGCTGCACATACATTGCACAAGTCTTGCTTTATCTCACACCCAATGCCAGAATCATCAGCACATCTTTTTCGTATGCTGTTCCTCCAGTGCTAAATcctattatttatgttttaaacacagcagaaatcaaagacattattaaaaaaatgattaaaaacaaatctgCACCGATCAGAGAGAACATTTCAAAATGATTCTGTAACATTTTTTGTTATGTGATTGGGTCTGAATGACAGTAGAAAAAAACATCTCTGGgaagaagtttttttttgtgctatttttTCCTATATAACCATCTTAAGAATTtacttttaaagacaaaaaatgcAACCCAAACAATTcagattcttaaaaaaataaaatacatgaaaCTTTTATGTTACGGTTTTTAATCCAGCTGATTTCTagtgtttctgtttgtttgataTTGTACTGCAAAAGAAGGAAAATATTAATGTGACTTAAGTGAGAAATCGGTGCCACAGTATGTTGACATTTCATATTGCCTTAATCCTATCAATTACTGTCATTTACaagtatttttgtttcttttctgctAATTCAGTGAGAAGtgtgatcattttaaatattacttctTGATGTTTGTGTTTTCATTCCAAGTGTCAATTTTAAAATGACCCTCTTTTTTTGtacagtaatacatttttaaatatgaaacCATGATACACACAAATGTAACTTTGCATTTtccgtttattttttctgtttttaaagctTATTAAAATGACAGCTTTGATGCCTAAAGCTTTGATTCAAACATATGAACatctaaaatttattttaatttacatgaaTAAAAGTCGACTTGCATT
>TCONS_00018379
AGTGATCTTTGTGATGTGGGAAATTAAGGACCAGCATTTGCAGCTAATAATTTTCATTTACAGCAACTCACAAGCAATCAGACAGATGCTGTCATTTTTTGCTCAGACTAAAAGTTTTGTTTGCAAATCtgtgatttaaatgtttttgttttttatgctaACTTTTTTGAAGGTATTGTATTAGAATTTAAACTGTAGTTACAGTTTTGAAATGATCTAAATGATTTCTTAAATGTTGCATATGGCTTTGTGATAATTTCTTTTTTCAGCTTGCTCAAAACATCAAACGAAAAACCGCCATGAGTTCTGTAAATGCAAGTTTTTCCCAGAATATCTCCATTGTTCGTCCTGAGTACTTTTTCATCAGTGGACTTTCAGGTATACCATACAGCAGTTATTACTATATTTTCTTATTTGTCGTTTATTTTATATCTGTAATTGGGAACTCTGTAGTCCTTCTCATTATAGCTGTTGACCGGAGTCTGCACAGTCCAAAGTACATTGGTGTGTTTAACTTGGCCTTGGCTGATATTGGTGAAACTAATGCACTGATTCCTAACATGATGAAGACTTTTCTGTTTAACTCTCAGTACATCTCCTATAATGGTTGCATGGCAAATATGTTTTTTGTGTTCCTCTTTAATTCCATACAGAGTTTCACTCTTGTTGCTTTGGCGTATGATCGATTCATTGCAATTTGTTTACCATTGAGATATCATGCTATTGTGAATAATACCAGTATGATCTTAATTTTCCTAGCAATATGGGCATTTAATTCTTCTGTGGTAGCCTCTATGGTGTCTATGATCACTCGACTTTCAATCTGTAAATCAAATGTAATACCAAGTTATTTTTGTGATCATGGACCAATATTTAGGTTGGCTTGTAATGACATCAAAATTAATgagttttttgctttttttatctcGATTTTATATCTTACCATGCCAATGGTCATTATTGCCCTTTCATATCTGAACATTTTTCTTGCTTTGATCAAAATCACAACTTGGGAAGGACGGTTAAAAGCATTGAAGACCTGTGTGTCCCACCTGTTGTTAGTAGGAATATTTTTTCTCCCTTTACTCTGCACTTACATTGCACAAGTATTGCTTGCTCTTACTCCAAATGCCAGGGTCATCAGCACATCTTTGTCATATGCTATTCCACCAATGTTAAATcctattatttatgttttaaacacagctgaaattaaatatataattagaaAATTGTTTAAAAGGAGACTGAGGTCAGTTAGTGATAACATTTCAAAATGATTTTGTTCATGCTGGGGTCTgtatcaaagtaaaaaaaaatgtcagtgaaCAATATGCTGCTGAATGGTCTGCTGAAATATTATACTGTTATCTAAACTTTGTTTATTATTCAAGTTGATTTCAAGTGTCTGTGTTTCTTACTGTTATCAAGACAGGTAAACAGGAGAATAAACTTTTTGACTATTATTTGAAATCATTGCTGTAGAACATTgacattttgtatttgtttaggcACATCATTCAGTGTGatccatttttgtttttatattttctgcAAAATCATAAGATATGACACATTATTTgtaattcattgattcattcacaaGAGTATGTTTGTCTGAGATCTGCAGATGTAAATTTAGTCTGAAAGAATCTTTACAATGTTTGGGATGATGCCACATTTGTGTGATTAAAGACTTGTGTATTGTTAAAGATGCCTGTTCttaaatttaagtaaatgttGTTCAATTCTGTGCAATCCCCTGATTTGTATTTTCAAGTATTGACAAATTTCTCCTACTGTTTATACATGCTTATTGtataactataatataataactgCAATTActtgtttaactttttattaccACCTCAAAAAAGGTCAGTGATGCCAAATGTATAAAACTAAATCGTTTTTCTTACATATGCTGGTTGAAATTATGTAATATCTACATATTTAACTACTTGAGTAAATTGTGGTTAAAAACAGTCATGCTTTATAATTtgtaactaaatattaaatattgcaataata

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050896 response to stimulus biological_process
GO:0007608 sensory perception of smell biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-010308-17 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in olfactory rosette.
ZDB-GENE-010308-19 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in olfactory rosette.
ZDB-GENE-000329-16 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in olfactory epithelium and olfactory rosette.

Ensembl:

ensembl_id ENSDARG00000025658 ENSDARG00000041030 ENSDARG00000086633

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018375 False 897 mRNA 0.36 9 31331356 31364729
TCONS_00018376 False 1925 mRNA 0.34 2 31350122 31352129
TCONS_00018377 False 1697 mRNA 0.32 2 31355846 31357634
TCONS_00018379 True 2034 mRNA 0.32 1 31364709 31366742

Neighbor

gene id symbol gene type direction distance location
XLOC_009346 or118-2 coding downstream 7424 31320017 ~ 31323932 (-)
XLOC_009345 or118-3 coding downstream 12080 31317358 ~ 31319276 (-)
XLOC_009344 AL928851.1 coding downstream 15808 31315209 ~ 31315548 (-)
XLOC_009343 or118-1 coding downstream 17424 31311716 ~ 31313932 (-)
XLOC_009342 AL928851.2 coding downstream 31678 31299563 ~ 31299678 (-)
XLOC_009349 or111-4 coding upstream 4448 31371190 ~ 31372486 (-)
XLOC_009350 or111-5 coding upstream 15273 31382015 ~ 31383588 (-)
XLOC_009351 or111-6 coding upstream 22661 31389403 ~ 31390985 (-)
XLOC_009352 or111-7 coding upstream 33181 31399923 ~ 31401361 (-)
XLOC_009353 or111-8 coding upstream 38064 31404806 ~ 31406093 (-)
XLOC_009333 AL928870.1 non-coding downstream 318644 31005981 ~ 31012712 (-)
XLOC_009331 NA non-coding downstream 407267 30923150 ~ 30924089 (-)
XLOC_009330 NA non-coding downstream 416095 30911402 ~ 30915261 (-)
XLOC_009360 AL929092.1 non-coding upstream 180992 31547734 ~ 31547852 (-)
XLOC_009362 CR388091.1 non-coding upstream 696550 32063292 ~ 32063409 (-)
XLOC_009364 NA non-coding upstream 1046572 32413314 ~ 32433673 (-)
XLOC_009366 CR855389.2 non-coding upstream 1266548 32633290 ~ 32635777 (-)
XLOC_009367 NA non-coding upstream 1446994 32813736 ~ 32817995 (-)

Expression


Co-expression Network