CI01000046_00035472_00036260


Basic Information

Item Value
gene id CI01000046_00035472_00036260
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 34016 ~ 36684 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_00035472_00036260.mRNA
ACGAGGAACACTGTGCGAGCCTCTATGACACATTCAGTAGTTGGTAAGTGAGACCAGTAGGGGGTCGGATCGCTTTCCCCTGATCTCCAGCCTCCAGCTCAAGTTCGGTCTCAGTGCTGCATGAACGCGCGGCGAGAGAGGGAGGAGGACACTTCCCTCTCCAGCATCAAACGCGAGGGATGCGCTTCATCGCCTTAGGGGACTGGATGGATGGAGCGACAGGGTCATGAAGGTGACCACAACCTCTGGGTTGGATTTAGGGGGCCGTTACCGCAGAAGGAGCCTATCCATAATTAATAAGACCGAGTCGGAGATCCTAGAAGCGAAGCGCAACCACCGGCGAGTCATGTCACCAACTGACAGCGCTTCCAGAGGAGCTGACGAGGAGGACAAAGGAGGATGAAGGAGGCAGAGGAGGATTATAATGAAGCTGAGTGGCAAAGGACTGTGCACCATCGTCTCCAGCAGTCTGCTCTTCGTGTGTGCCGTGAGCACCGTGGTCGTGGGATTCAAATGCATCGCGCTGGGCTCCAGGGTGCGAGCGCACTTCCACCTGGGCACCGCGGCCGGCGCGTTCTACTCGGGCATCCTGGTGGCGCTCGGGCAGGTGCTGATGGGGGTGGCGCTGGTCTTTTGCCGGGGCAAGCCCAGGTGTGCGAATTTCTTCCTCTTTGGGATCTTAGTGTTTCTTCTGGGGGTCCTCACGGCGTTCTCGGGCGCGGTGGTGGATGGCGACACGGTGTCCCTGGTGGAGAGGAAATACGCGCACTATTGCCTGGACTCTGTGGATGTAAACCCGGCGTGCGACGGGCTCAAGGTGTACCAGCGGGGGCTGGTGGTCTCCACCGTACTTAACACTCTGGAGTGCCTCCTGGGGCTGATGAACCTAGTTATCATTAAGCGCTACCAAGCGGAGCGGATTCTCCGGAGACGCCGGACGCAGCGGCGGAGCGCGCGGATTATCCTGAACGAGGAGCGCGACTTCGCGGTCACGGAGTTCCAGCCGGTGTCCTACATCAACCTGGGGGTGTTTCACGCGCTGGACGAGGCGGACGGGGAGGTGCAAAGCAGGGGCCACCCGTGCATGGAGCTCCCGGGCTATTCGCCCACCAATCCGGAGCTTAATCACTCATACCCGTTCTCTTACCCGCTTCACAGCGAGTTGCCACCCGCCTACGAGGACATATTCCCCGGAGAAGAGAGCAGCAAATAGCAAAGGAACCGTTTTGCAGTGACAATCACGCTGAACTTGGAATTGACGCGTTTATTTCGAGTTGCCTAATGCACTTTTTATTCGCTGGAGGTTATACACTCGAAACCCCACAGCTGTGCATATAAACTACAAAACGAACAGGATTATGTGCAGCATTTGTTTTTCTGACCCTCCTGACTGACTGATTGTATTCTCGGTTCATCCCATGTCAAAATCCCAAAGGTTTGTGTACAGGATTCCCATTGGAATTTTTGTCATATAGTTTGGAGTCTGTCCTAAAGGATCCTGATTTTCTTACAGTATTCCAGCAGGGCACAAAACTAACAGAAGTTACCAACTGAGCAAAAAAAGAACATATGAGAAGGTAAACGTAATAGAAGTATGCATTATTTCCGTTTTTCTGATTGATTGTATTCCCAGTTCATCTCTAGTTAAAAAGGTTTGTGTACAGGATTCTTATGGAATTTTTTGTTATAATTGGACCTGTTTTACAGTATTCCAGCAGGGCACAAAATGAAAAGAAGTTACCAACATATGAGAAGGTAAATGTTATGGAAGTATGCATTATTTACATGCAACATTGTATTTCTTTTTTTAAACCTAATCAATAGATTGTGTTTCAATTCACCCCTAATCAAAGTCCTAAAAATTGTGTGTGTGTGTTATGATTTAGAACCAATCATAAATGTGTCATAGTATTCCAACAGAAAACAAAACAAGAACAAGTTCCCAGTTGGACTATTACAATTACCAACAGGATAAAATGTCCCTGAAAGGCCTGAAATGAGACGTCTCATGATTTGTTTATAATCTTTTCATCTCTGATGTTTCAGACTGTTGGCGACATTAAAATGACAAGCATTACCCATCAGACAGAAAGCTTCTGCTGGCCAGCGTTTGGATATGATTAATGTTTCTCCATCGTGTTGTTCCAGAGTAATAGGAGAACATGTTTATCTGAAACACATTTTATGTCAGGTTCTGGAGTTGTATGGTTCTCCTCTAGTCTAGTTTATTCCGGCAACACTTAAAACCTGCTGGCGATGAAGTAAAGAGTGAAATAATTATTATTTAAATGTTTTTTGACCATCATGACTGAGTCCTAGTCCTACAGAATTCCATTTGGAATGTCTGTTATATTATTCACTGTAAAAAGTAAGTTACCTGGTTCACTGAAATTAAAAATTTGAGTTAATACAATGAAGGTGATTGATTTAATCAGCAGAAACTCAAAATATTATGTTTTCTGAACTGCATTAATTATCTAAGTTGAATTGACAAAAGAAAAAATGTTGAAATAACAATGAATGAAAATATGTTTTTACAGTGTATTGGAATGTCTGTTATTTGACATTATTCCAATAGAACACAAAACAAAAAGACTTTCCAAATATGCAATACACAATAGATATAATATTATTCTGTATTTTTATTATTAATATGCCAACAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_00035472_00036260.mRNA True 2669 mRNA 0.45 1 34016 36684

Neighbor

gene id symbol gene type direction distance location
CI01000046_00055148_00059869 FNTA coding upstream 18131 54815 ~ 59869 (-)
CI01000046_00063416_00065082 NA coding upstream 26469 63153 ~ 65082 (-)
CI01000046_00085822_00091135 AURKB coding upstream 48500 85184 ~ 91135 (-)
CI01000046_00224464_00306703 FAT4 coding upstream 187761 224445 ~ 306703 (-)
CI01000046_00332581_00354353 ANKRD50 coding upstream 295897 332581 ~ 354353 (-)
G195069 NA non-coding downstream 9169 24611 ~ 24847 (-)
G195065 NA non-coding downstream 22287 11399 ~ 11729 (-)
G195070 NA non-coding upstream 2366 39050 ~ 39331 (-)
G195071 NA non-coding upstream 5685 42369 ~ 42603 (-)
G195073 NA non-coding upstream 6643 43327 ~ 43540 (-)
G195074 NA non-coding upstream 7329 44013 ~ 44252 (-)
G195170 NA non-coding upstream 272944 309628 ~ 309850 (-)
G195097 NA other upstream 370739 407423 ~ 426326 (-)
G195098 NA other upstream 634052 670736 ~ 676128 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other upstream 741049 774434 ~ 780293 (-)
G196463 NA other upstream 2131582 2168266 ~ 2168644 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_007069 FP102783.1 non-coding NC_007125.7 CM002898.2 3571256 ~ 3576820 (+)