CI01000046_01047300_01066367 (UNKL, UNKL.S)


Basic Information

Item Value
gene id CI01000046_01047300_01066367
gene name UNKL, UNKL.S
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1047209 ~ 1066367 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_01047300_01066367.mRNA
TTGCTCATATTGGCCTTGCAGCGGCGCGCGAGAGCATGAGTAGACGAGAGGGTCCCCGCGCACGCGCTATTATTGTTTTGACTGAAAATGCCGTCGGTTTCGAAAACGGCGGCGAGCGCTTCTCCTCAAACCGAGAAACCAACCCACTATACCACAAATGCACACAGCATAGACCCTTTACGTGTTTCCACTGGCATTTTCTAAACCAGCGAAGACGGAGACCTATACGGAGAAGAGACGGGACTTTTAATTACAGCCCAGATGTGTATTGTACGAAGTATGATGAAACTACAGGAATATGTCCCGATGGAGACGATTGCCCTTATTTACACCGGACCACCGGTGACACAGAGCGCAAGTACCATTTACGCTACTACAAGACCGGCACCTGCATCCATGAGACAGATGCTCGTGGACATTGTGTGAAGAATGGCCTCCACTGCGCCTTCGCTCATGGACCACATGACCTTCGGCCACCGGTTTATGATATCAGAGAGATCCAGGCACAGGAAGCTCTGCAGAATGGCCAGTTGGGATCTGGGGAGGGAATTCCTGACCTGCAGCCGGGTGTGCTGGCCAGCCAGGCCATGATTGAGAAGACCCTAAATGAAGACCCACGTTGGCAAGACACCAATTTTGTTTTGGCCAACTACAAAACTGAGCAGTGCACCAAGCCTCCACGTCTATGCAGGCAGGGCTATGCCTGTCCCCACTATCACAACAGCAGAGATAGGAGAAGAAATCCCAGAAAGTTCAAATACAGGTCGACGCCCTGCCCGAGTGTAAAGCACGGTGATGAATGGGGCGAGCCCTCCAAGTGTGAGAGTGGGGACAGCTGTCAGTACTGCCACTCTCGCACCGAACAGCAGTTCCACCCAGAGATTTACAAATCTACTAAATGCAACGACATGAGGCAAACTGGATACTGTCCAAGGGGACCATTCTGTGCTTTTGCACATGTGGAAAGAATTCCTTCCACAGAGGAGACCATGAGCACGTTGCTCTCAGCAATGCAGTCGGGCTCTCAGTCCAAGCTGGGCTCCCAGCAGTATCCAGAGTGTCCAATCAACGAGTGGAGCGCCAACACGAATTCCATCACCAGCAGCGCGAGTAACAACGGCCAGACAGGAAACGTATCATGCTCTAATAGTCCGACTGTAACACCAAGCTCAGGGAGCAACAGTTCTTTGTCCCCAATTGGACCCATCGGCAGGCCAAAATGCTTTACTAATGGTAGCTTATGTTCAGAGTCCACCACGTCCAGTGTTTCCTCTCCGACGTCTAACTATCCCAAAGCTCCGGGTTTTGAACGGGAGGATCAGGCAAAGAACCAGAAGAGCCAGTCTGGGGAAAATAATCAAAAGTTAATGGACCAAGACAAACAGGCTCACGGCGGTGTGTTCTCAGTTGTGAACCCACTAGCGTCCAGCATTACATCGAGCATCACGTCCAGCTTGGCCTCCAGTATCGGATCTGACAGTTCGTCGCCCACCACTTTATCAACCATGAATGCAAAAGCTACGCCTTTTTATCCAGGCAGCAATACTGTGGAGTCTGTAATAGGATCTGCACTTGACCTAAATTTTAGTGACATCAATGTTGCCTCCCTCGACAAAGAGCTAGAGGACCAGGACAACAATGGCCTTGGTTTAACAAGTCTGAATGGCGGAGCAGGGAGTATATGGGACTTTATGAGTGGCAGCTTCTCTCCCAGCCCGTCTCCAGTGTTCAGCAGCCTTACTTCCAGCACGGTCGGCTCCAGCAGCGCAGACATCGGCCGGCTCCTCCGAGAACTGGATGAAGCCAAGCGCAAGATAAAGCAATGGGAGGAGGCCTGGCACCAAGTCAAACAGGCCTGTGAAGCGTGGCAGAAAGACGCTCACGAAGCGAAAGAACAAGCTAAATCGGCAGAGGCGGAGCGGCAGTTGGCAGAGCAAAAGCGAGAGGACACCGAGCGCAAGCTGAAGGAACTGCAGGGAGACTTTGACGTTTTGTGTCGCTCCCCCAACACGCCTCTCCTGCGCAGCTACGGCGAGCTGGACCAGCTCCCTCTGCCAAAGCTCCGCTCCATCCAGAGCCAGCTGCGCTCTGACCTAGACCTCATAGACGGGGTAATATATCAGCTTCAGTCAAAGAAATGTATAGTTTGCCAAAAGCATGATCGTTCCATTGTCCTGCAGCCTTGCCAACATTATGTACTTTGTCAGAACTGTGCGTCTGGTAAAACGGAATGTCCTTACTTATTTCATATAGTGATTCAATTGATTTTGTTTTATTAGAATCTAAGTGGTGTTTGACTGATACAAGTTCTTAAATGCAATACCTGTTCTGTACAAGCTAGATTTTTATCCATTTTCATAAAGCATTAAA

Function

symbol description
unkl Predicted to enable metal ion binding activity. Predicted to be located in cytoplasm. Orthologous to human UNKL (unk like zinc finger).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_01047300_01066367.mRNA True 2370 mRNA 0.51 16 1047209 1066367

Neighbor

gene id symbol gene type direction distance location
CI01000046_00790248_00814884 MKL2B coding downstream 232325 790183 ~ 814884 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S coding downstream 267023 774434 ~ 780293 (-)
CI01000046_00749734_00763064 NA coding downstream 283728 749684 ~ 763481 (-)
CI01000046_00702360_00703954 NA coding downstream 343255 701939 ~ 703954 (-)
CI01000046_00690567_00697727 NA coding downstream 347337 690140 ~ 699872 (-)
CI01000046_01074910_01076076 GPER1 coding upstream 8431 1074798 ~ 1076424 (-)
CI01000046_01098117_01099160 GPR146 coding upstream 30891 1097258 ~ 1099160 (-)
CI01000046_01167146_01194022 BAIAP3 coding upstream 100661 1167028 ~ 1194022 (-)
CI01000046_01236373_01241067 UBE2I coding upstream 169625 1235992 ~ 1241067 (-)
CI01000046_01421301_01451701 HS3ST2 coding upstream 354145 1420512 ~ 1451931 (-)
G195307 NA non-coding downstream 113601 873108 ~ 933608 (-)
G195333 NA non-coding downstream 143433 903376 ~ 903776 (-)
G195282 NA non-coding downstream 206517 840427 ~ 840692 (-)
G195280 NA non-coding downstream 207506 839364 ~ 839703 (-)
G195403 NA non-coding upstream 18477 1084844 ~ 1085092 (-)
G195412 NA non-coding upstream 53357 1119724 ~ 1119925 (-)
G195421 NA non-coding upstream 76718 1143085 ~ 1143475 (-)
G195422 NA non-coding upstream 77147 1143514 ~ 1143752 (-)
G195426 NA non-coding upstream 85007 1151374 ~ 1151694 (-)
G195098 NA other downstream 371081 670736 ~ 676128 (-)
G195097 NA other downstream 620883 407423 ~ 426326 (-)
CI01000046_00063416_00065082 NA other downstream 981298 63153 ~ 65082 (-)
G196463 NA other upstream 1101899 2168266 ~ 2168644 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other upstream 1799892 2866070 ~ 2867794 (-)
G198265 NA other upstream 2691256 3665243 ~ 3800101 (-)
G199054 NA other upstream 5030992 6097359 ~ 6097674 (-)
G199014 NA other upstream 5297811 6364178 ~ 6375406 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025671 unkl coding NC_007114.7 CM002887.2 45778810 ~ 45818361 (+)
bowfin (Amia calva) AMCG00018186 NA coding CM030135.1 CM030135.1 4033690 ~ 4057473 (-)