G195127



Basic Information


Item Value
gene id G195127
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 683695 ~ 684595 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU221647
TTGAAACAAAAACTAACAACAGTAGTGGGTATACCACAACAAAAAATGTCAATGTTTCAATAACTTGTCATGTGCCCTTGAGCATCAATTACAGCTTGAAAACAACGTCTCATGCTGTTCACAAGTCGGCTTATTGTCTGCTGAGGCATGGCATTCCACTCTTCTTGAAGGGCTGTCATTGAGGTTCTGGGGTGCAGGGTTACCACCCTCTACACGACAACTCAGCTGATCCCGAAGGTTTTCTATGGGATTCAGGTCTGGAGAAAGTGCAGGACACTCCATCTGAGGTACCCTAGCCTCCAGCAGCCGTTCCCTGATGATGCAACCTCAATGAGCTGGGGCATTGTCGTCCATGAAGATGAAATCAGGCTTGTGTTGCTCATGCAGAGGCACAATGACAAGATTAATGATGTTATTCAGGTAGTATTGGCTTGTCACAATACCATTCACAAGGTGTAGGGCAGTTCTGTATTGACTAGACACACCTGCCCAGACTGTATCCAAAGGCCCGTCTGGTGACAACAGTGGCTGATGCATAGCCTGTCTCCAATCCTTTCTGGACATCATTTCTGCTCAATGTGAGTCAACTTTCATCAGAGAACAGCACTGAGGCCCACTGGTTCCTCGTTCCTCATACAATGACGTCTGTGCCTGGTGGTGTGGTCAGGTACCCTTGCAGGTCGTATAGCAGGCAGACCATACTGATGTAAGTGGTTTCGAATCGTCTGACGTGACACTCGGGTGCCTCTCACCTCCCTTAAACATGCCTGGAGTTGAGTCGCATCCGGTTCCGCAGGACACTGTTCACAATGAAGCGGTCATCAGCATGGGATGTGGCCAAAGCACATCCACTTTTATGCCTTTCTGTGACTCTTCCAGTTTCTCTGTGTCTCTGTTGCAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU221647 True 901 lncRNA 0.48 1 683695 684595

Neighbor


gene id symbol gene type direction distance location
CI01000046_00665298_00665879 NA coding downstream 17816 665298 ~ 665879 (-)
CI01000046_00660745_00664133 NA coding downstream 19562 659204 ~ 664133 (-)
CI01000046_00619217_00636285 NA coding downstream 47249 618969 ~ 636446 (-)
CI01000046_00589815_00591549 NA coding downstream 92146 589648 ~ 591549 (-)
CI01000046_00567573_00573618 UBE2KB, UBE2K, UBE2KA, UBE2K.S coding downstream 108645 566913 ~ 575050 (-)
CI01000046_00690567_00697727 NA coding upstream 5545 690140 ~ 699872 (-)
CI01000046_00702360_00703954 NA coding upstream 17344 701939 ~ 703954 (-)
CI01000046_00749734_00763064 NA coding upstream 65089 749684 ~ 763481 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S coding upstream 93077 774434 ~ 780293 (-)
CI01000046_00790248_00814884 MKL2B coding upstream 105588 790183 ~ 814884 (-)
G195104 NA non-coding downstream 1028 678260 ~ 682667 (-)
G195124 NA non-coding downstream 13127 670069 ~ 670568 (-)
G195250 NA non-coding downstream 83745 599140 ~ 599950 (-)
G195249 NA non-coding downstream 84675 598285 ~ 599020 (-)
G195245 NA non-coding downstream 95310 588125 ~ 588385 (-)
G195268 NA non-coding upstream 19838 704433 ~ 722196 (-)
G195101 NA non-coding upstream 50475 735070 ~ 736556 (-)
G195115 NA non-coding upstream 80302 764897 ~ 770106 (-)
G195280 NA non-coding upstream 154769 839364 ~ 839703 (-)
G195098 NA other downstream 7567 670736 ~ 676128 (-)
G195097 NA other downstream 257369 407423 ~ 426326 (-)
CI01000046_00063416_00065082 NA other downstream 617784 63153 ~ 65082 (-)
G196463 NA other upstream 1483671 2168266 ~ 2168644 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other upstream 2181664 2866070 ~ 2867794 (-)
G198265 NA other upstream 3073028 3665243 ~ 3800101 (-)
G199054 NA other upstream 5412764 6097359 ~ 6097674 (-)

Expression



Co-expression Network