G195535


Basic Information

Item Value
gene id G195535
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1384752 ~ 1384970 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU222096
GTTTTAAATATGTCTTTAGTAGCTTTCTGGGCATCTGAAAGTGTTAATTATCTTGCTGTCAATGGAGGCCTCACTGAGCCATCGGATTTCATCAAAAATATCTTAATTTGTGTTCTGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATGAGGGCAAATAATTAATGACAGAATTTTCATTTTTGGGTGAACTAGCCCTTTAATGTTAGAGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222096 True 219 lncRNA 0.38 1 1384752 1384970

Neighbor

gene id symbol gene type direction distance location
CI01000046_01318513_01343464 USP31 coding upstream 40557 1316670 ~ 1344195 (+)
CI01000046_01289846_01293954 KCTD5A, KCTD5 coding upstream 90416 1289568 ~ 1294336 (+)
CI01000046_01275798_01283718 PDPK1A coding upstream 100652 1275798 ~ 1284100 (+)
CI01000046_01255895_01262232 NA coding upstream 122205 1255895 ~ 1262547 (+)
CI01000046_01246234_01251650 NA coding upstream 133063 1245732 ~ 1251689 (+)
CI01000046_01540075_01668012 HS3ST4 coding downstream 155105 1539494 ~ 1668012 (+)
CI01000046_01865451_01881353 NA coding downstream 480481 1865451 ~ 1881369 (+)
CI01000046_01903950_01922429 KDM8 coding downstream 517120 1902090 ~ 1922439 (+)
CI01000046_01933932_01935589 NA coding downstream 547920 1932890 ~ 1937822 (+)
CI01000046_01963803_01965901 NA coding downstream 578585 1963555 ~ 1968371 (+)
G195049 NA non-coding upstream 155319 1229228 ~ 1229433 (+)
G195048 NA non-coding upstream 155833 1228716 ~ 1228919 (+)
G195047 NA non-coding upstream 156885 1227485 ~ 1227867 (+)
G195038 NA non-coding upstream 176424 1206445 ~ 1208328 (+)
G195018 NA non-coding upstream 227420 1157127 ~ 1157332 (+)
G195564 NA non-coding downstream 11793 1396763 ~ 1397086 (+)
G195909 NA non-coding downstream 358830 1743800 ~ 1744017 (+)
G196035 NA non-coding downstream 481534 1866504 ~ 1866807 (+)
G196038 NA non-coding downstream 485728 1870698 ~ 1870980 (+)
G195003 NA other upstream 223062 1161157 ~ 1161690 (+)
G194721 NA other upstream 924407 458008 ~ 460345 (+)
CI01000046_02451052_02454565 MAFK other downstream 1054947 2442395 ~ 2457280 (+)
G196936 NA other downstream 1802025 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 2558858 3943794 ~ 3945500 (+)

Expression


Co-expression Network