Gene
RNA
| Item | Value |
|---|---|
| gene id | G197978 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 2966752 ~ 2966976 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU224705 | True | 225 | lncRNA | 0.37 | 1 | 2966752 | 2966976 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_02873360_02887683 | SNX8A, SNX8 | coding | downstream | 79069 | 2872981 ~ 2887683 (-) |
| CI01000046_02866255_02867695 | MRM2, FTSJ2 | coding | downstream | 99057 | 2866070 ~ 2867794 (-) |
| CI01000046_02480126_02480593 | PSMG3 | coding | downstream | 484811 | 2479876 ~ 2481941 (-) |
| CI01000046_02458763_02477098 | TMEM184A | coding | downstream | 489654 | 2458472 ~ 2477098 (-) |
| CI01000046_02446041_02449287 | NA | coding | downstream | 517403 | 2445666 ~ 2449349 (-) |
| CI01000046_02972183_02978771 | LFNG | coding | upstream | 5207 | 2972183 ~ 2978771 (-) |
| CI01000046_03067420_03068783 | CHST12A, CHST12 | coding | upstream | 100391 | 3067367 ~ 3068783 (-) |
| CI01000046_03080433_03083966 | EIF3B, EIF3BA | coding | upstream | 113457 | 3080433 ~ 3084292 (-) |
| CI01000046_03095399_03129278 | GNA12, GNA12A | coding | upstream | 127977 | 3094953 ~ 3129652 (-) |
| CI01000046_03140684_03161621 | CARD11 | coding | upstream | 173406 | 3140382 ~ 3161621 (-) |
| G197976 | NA | non-coding | downstream | 4506 | 2961990 ~ 2962246 (-) |
| G196692 | NA | non-coding | downstream | 191076 | 2775371 ~ 2775676 (-) |
| G196500 | NA | non-coding | downstream | 684218 | 2282268 ~ 2282534 (-) |
| G196479 | NA | non-coding | downstream | 734563 | 2231938 ~ 2232189 (-) |
| G196469 | NA | non-coding | downstream | 786004 | 2180453 ~ 2180748 (-) |
| G198002 | NA | non-coding | upstream | 49484 | 3016460 ~ 3016829 (-) |
| G198012 | NA | non-coding | upstream | 81203 | 3048179 ~ 3048425 (-) |
| G198013 | NA | non-coding | upstream | 82125 | 3049101 ~ 3049519 (-) |
| G198014 | NA | non-coding | upstream | 82644 | 3049620 ~ 3049840 (-) |
| G198020 | NA | non-coding | upstream | 90754 | 3057730 ~ 3057946 (-) |
| G196463 | NA | other | downstream | 798108 | 2168266 ~ 2168644 (-) |
| CI01000046_00777923_00780186 | RPC11, POLR3K, POLR3K.S | other | downstream | 2186459 | 774434 ~ 780293 (-) |
| G195098 | NA | other | downstream | 2290624 | 670736 ~ 676128 (-) |
| G195097 | NA | other | downstream | 2540426 | 407423 ~ 426326 (-) |
| G198265 | NA | other | upstream | 790647 | 3665243 ~ 3800101 (-) |
| G199054 | NA | other | upstream | 3130383 | 6097359 ~ 6097674 (-) |
| G199014 | NA | other | upstream | 3397202 | 6364178 ~ 6375406 (-) |
| G199130 | NA | other | upstream | 3611004 | 6577980 ~ 6594210 (-) |
| G199181 | NA | other | upstream | 3859709 | 6826685 ~ 6830453 (-) |
