G198291


Basic Information

Item Value
gene id G198291
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 3720019 ~ 3721789 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU225083
ATCAAAGTCACATGCAGATGCAAACTTTTATTCATGTCTTTTTCAATAAATCACAGTTCTGAATCAATGACTTCTCATATAACCCATTTGATATAAAAATCATATCACTAGGTCACTGCTGACTCCCACCACTAGTAGGCTATTTTATAATACTCATGAATTCCACAGATATTCTGTACTAAGTGTGTAGGGAGCAGTGAACACAACTGTGAATTGGAACACAGCTCCAATTACCTCTAATATGCTCAATTCGTCCTCTTCATCATCCTTGACCACAACAGGGGCATTTGGTACGAATCTGACAGGTTCATCATCAGAATCTGACGATGAGGATATGGTTATGTAGGACGTCCTCGTCCTAACTTTCTTAGCTGACAAAAAAAACAACAACAAAGTAACAAAAAAGAGGTCAGGTCGTACAGAATACCACTATCACAATAAAGCCTTGGTATTAGTACCTCGACTGCGGTGGGTGTTGAAACTAGCCAGGTGGATGACATCATCATCACTGGACCCGTCAGCCATGATAAGACACACAGACTCCCTGAGTCGTCCACCTTCTCTCTCTCACACAAACACCCATGCACACACACAGGAACCTGAAATGAGACCTCTCAGTCACAATTTCCAACACATCGAAAGCGTTTGATCGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225083 True 655 lncRNA 0.42 2 3720019 3721789

Neighbor

gene id symbol gene type direction distance location
CI01000046_03643306_03647935 ARPC1A coding downstream 72084 3642182 ~ 3647935 (-)
CI01000046_03635227_03641081 ARPC1B, ARPC1B.S, ARC1B, ARPC1B.L coding downstream 78938 3634980 ~ 3641081 (-)
CI01000046_03606941_03615212 MMD2, MMD2A coding downstream 104807 3606717 ~ 3615212 (-)
CI01000046_03140684_03161621 CARD11 coding downstream 558398 3140382 ~ 3161621 (-)
CI01000046_03095399_03129278 GNA12, GNA12A coding downstream 590367 3094953 ~ 3129652 (-)
CI01000046_03761959_03768003 FSCN1, FSCN1A coding upstream 38662 3760451 ~ 3768116 (-)
CI01000046_03777712_03789322 NA coding upstream 55802 3777591 ~ 3789340 (-)
CI01000046_03825822_03873637 TNRC18 coding upstream 103376 3825165 ~ 3874959 (-)
CI01000046_03920813_03930435 SLC29A4 coding upstream 198446 3920235 ~ 3930634 (-)
CI01000046_03946243_03948935 CPSF4 coding upstream 224441 3946230 ~ 3949544 (-)
G198289 NA non-coding downstream 153864 3565944 ~ 3566155 (-)
G198318 NA non-coding downstream 159479 3560231 ~ 3560540 (-)
G198307 NA non-coding downstream 165767 3552760 ~ 3554252 (-)
G198281 NA non-coding downstream 167329 3551499 ~ 3552690 (-)
G198264 NA non-coding downstream 176493 3543300 ~ 3543526 (-)
G198286 NA non-coding upstream 169231 3891020 ~ 3891811 (-)
G198404 NA non-coding upstream 170659 3892448 ~ 3892862 (-)
G198405 NA non-coding upstream 171816 3893605 ~ 3893934 (-)
G198406 NA non-coding upstream 173747 3895536 ~ 3897457 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 852225 2866070 ~ 2867794 (-)
G196463 NA other downstream 1551375 2168266 ~ 2168644 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other downstream 2939726 774434 ~ 780293 (-)
G195098 NA other downstream 3043891 670736 ~ 676128 (-)
G195097 NA other downstream 3293693 407423 ~ 426326 (-)
G198265 NA other upstream 35834 3665243 ~ 3800101 (-)
G199054 NA other upstream 2375570 6097359 ~ 6097674 (-)
G199014 NA other upstream 2642389 6364178 ~ 6375406 (-)
G199130 NA other upstream 2856191 6577980 ~ 6594210 (-)
G199181 NA other upstream 3104896 6826685 ~ 6830453 (-)

Expression


Co-expression Network