XLOC_000950 (CU986306.1)


Basic Information

Item Value
gene id XLOC_000950
gene name CU986306.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 2704604 ~ 2714275 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001511
CTTACAATGTGGAGGACACTCTCTCAAGATAAGTCACAGCTACAGTCGGAGAGTGAAGGAGAAATCAATGAGAGCTGCACTGCTTCTCCATCTGAACACACAGAGATACAGTACAGAACATCAGCTGAAGAGCTCAGTGTATGCTTTATCTGCTGAAATGAGTCCACTCTCAGCCTTTGATCTCTCATTCATCTGACTGCAAAAACTCCAACACTGCAAGTCCCAGCGGACACAATACTCTCAGATTTTGTCAGCTCTTCTTTTTTACCATTCCATGTGCACAATCGTCTGAGGATCTGAAGACGCTTTTGAAATCTGCACTACTGTCCATTTAAGCCCACTGTGTCTGTCTGTGGTCGAGCAGCAGATGCACAACATCAGCATCAAATAAACTATTCCATTAACCCCTTCACACCTGAATTATtttccaaatttcagaaaaataggatgtcatgtgatgtccattgtaatggacgcagggtctgaaggggttaaacgTGCTATAGTGTGAGCTCGATGAGTTTTCATTTACGTTTCTCTCTTTATCCCTCTCTTACACTGATATTTTACATCAAGGCCATTGTGACGACCCCAGGATTCCAGTTATgatgtggcagatcctgattgGGTGCCTGGTTGCTCACCAATTGGTTCAAAGCATA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096559

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001511 True 662 lncRNA 0.43 2 2704604 2714275

Neighbor

gene id symbol gene type direction distance location
XLOC_000949 NA coding downstream 201860 2495021 ~ 2502744 (-)
XLOC_000948 ggact.1 coding downstream 247058 2454094 ~ 2457546 (-)
XLOC_000947 ggact.3 coding downstream 251419 2446996 ~ 2453185 (-)
XLOC_000946 si:ch211-235f1.3 coding downstream 370350 2331637 ~ 2334254 (-)
XLOC_000945 NA coding downstream 453568 2239211 ~ 2251036 (-)
XLOC_000951 gpc5a coding upstream 385969 3100244 ~ 3295045 (-)
XLOC_000952 NA coding upstream 582332 3296607 ~ 3299853 (-)
XLOC_000953 CABZ01113467.1 coding upstream 591274 3305549 ~ 3330435 (-)
XLOC_000954 NA coding upstream 1130561 3844836 ~ 3846864 (-)
XLOC_000955 NA coding upstream 1315494 4029769 ~ 4074148 (-)
XLOC_000944 NA non-coding downstream 603343 2093996 ~ 2101261 (-)
XLOC_000940 NA non-coding downstream 699069 2000666 ~ 2005535 (-)
XLOC_000938 NA non-coding downstream 968040 1731517 ~ 1736564 (-)
XLOC_000956 NA non-coding upstream 1369903 4084178 ~ 4250442 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G244702 NA non-coding NW_019171228.1 APWO02000826.1 1521249 ~ 1521779 (-)