CI01000049_08452153_08453389 (CISD2)


Basic Information

Item Value
gene id CI01000049_08452153_08453389
gene name CISD2
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 8451142 ~ 8454233 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_08452153_08453389.mRNA
AATGAATCCTGGGCAATGTTGTTCTATATAATATAATATAATATAATATGATATATTATAATATTTAGCATTAAATTAATTTGATTCTTTGCACAGTATCCATATTTTGATTTTATATACAGCTGAAAACAATACTTTTTTTTCTTTTAATTTTGTGTGTGTGTGGGGGGGGGGGGGGGGGGGGGGNATTAAACAAATTGTTTGTACAATTTATATTAAGCCATATACAAAATAAATGCAATTCTTTACATCTCACATCAGCTGAATGAATGAATGAATGAATGAATGAGATTTACCTGTTTTAAATTACGCATTGCATTTTGTGTTTTAGGTTTACACAGGGTTACAACTTAACAAGCAATGTCCTGGCAGAAAATTACCAGTACCTTTTCCTTTTTTCTACAATTATTTCTTTCTTTCAGTGTACCTAACTGAACAACAATTATAGGTACAAGCTAATAACATGCTGTATCATAACTGAACAATTATTATTGAACAATTGCAACTATCAACTTAATTCACATATGCTGAAAAGTTGTTAAATCTAACAATAAAATTGTTAAGTTGGCAACCCCGCAAAAGAAAGTGGCGCGGTGAGACTAGCCAATCGCGCGCAACCAACTCTGCAGATGGTGATTGGTTGACGCGTTTACGGCGCGTCATGCGCTTACGCTTATTCACAGTCAAAACTCCGTGTATTTCTCCGTGTACTTCTATTCGTGAATAGTTCCTCTTCACGAGCAAACGGAAACGTCTACGCAAGTGCACTAACGCGATGACGTAGCAGAACGTCCCAGGAAATATCCTGCTGGGTCTCAATTAGAAGCGCACAAAGTCATTCAAGATGGTGTTAGAAAGTATCTCCAGGATTATCAAAATACAACTTCCAGCATACCTCAAGAAGCTGCCCCTTCCAGAAACAATCGGAGGCTTTGCGCGACTGACAGAGTGGCTGAGGCTTCTGCCGTTATTGGGGATTTTGGCTCTGTTGGGTTATCTGACCATCCGGCCCTTCCTGCCCAAGAAGAAGAAGCAAAGAGACAGTCTAATAAATCTGAAGATCCAAAAAGAAAACCCTAGAGTGGTGAATGAGATCGACATTGAAGACCTGAGGACTCCAAGTGTTTGTTACTGTCGCTGCTGGCGATCTAAAACGTTTCCTGTTTGTGATAAATCGCACTTAAAGCATAACGAGCTGACGGGGGACAACGTTGGTCCACTTGTTCTTAAGAAGAAGACTATGTAGCCCACCTGTTTTGGGACAGAACTCTATTTCTATATTTTTTAATGCATATTTTTTTCCTCTGAAAAACCTACTGTAATTTTGTTTGTTGTACTTTCCCCAAACATTTTCTTACTTATTGTGTAGAAATATAGAGCTGTAAATTCAGACTAAAATGCTCAAGATATTGTGGTTGATTTTGAGAGATTAATTATATTGATTTACTTTTTGTTACATTTTTCTGGTGTTTATTTTTTATATGCTTGGCAAATGTAGTGTGACTTTTGTGTGCAATATAACAAGACCACAAGGAAAAATGTCGGTTATCGTCGCCAATCAATCTTTGTGGCCAAGCGTCTTTACCATTCTTAATCTATATCTAGATTCAGTTTTAACTAAGTTGCCTTGTACTATTACTATTTTATGTGCGTTTGACATTTTGTAAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTCACATACTTTTAACTTTTCTATGTGAAGTACATTATTAGGATTTGCTTTTGTTGTTTTTACTTGTTTGCCATTTTCTACAGCATTATTCCTTAACCAACAAGAGTTCTAAAATGTTTGCTAAATTATTTTTAACATTTTCAAGTGCAGGATACTAAACTTGACTTTTGTTCATATACCTACAAACATTCCCCATTGCCTGAGATTGTAACAAAGCTATTGTTACACATTATTTATATATTACAACATTTATCATAATGTAACAAAGAAATGTGCCCTCTTTTCACTGTCCACCTGAACCAACATGCTGCAACAATTACAATTCATATTATATGTGCATTCATTCAAATTCAAAAGTTTTAAATAGCTTGACAATCCCTTGGTTTTCACACATTTTTTCTCGTGTCACTTGGTTTCATATTTGACAGACCTTGTTCATAGATGTTTTCATAAAGTACATTTGTATGATAACTGGAATGTGCCTAATAAA
>TU239618
GCAGAACGTCCCAGGAAATATCCTGCTGGGTCTCAATTAGAAGCGCACAAAGTCATTCAAGATGGTGTTAGAAAGTATCTCCAGGATTATCAAAATACAACTTCCAGCATACCTCAAGAAGCTGCCCCTTCCAGAAACAATCGGAGGCTTTGCGCGACTGACAGTTTCAGAGTGGCTGAGGCTTCTGCCGTTATTGGGGATTTTGGCTCTGTTGGGTTATCTGACCATCCGGCCCTTCCTGCCCAAGAAGAAGAAGCAAAGAGACAGTCTAATAAATCTGAAGATCCAAAAAGAAAACCCTAGAGTGGTGAATGAGATCGACATTGAAGACCTGAGGACTCCAAGTGTTTGTTACTGTCGCTGCTGGCGATCTAAAACGTTTCCTGTTTGTGATAAATCGCACTTAAAGCATAACGAGCTGACGGGGGACAACGTTGGTCCACTTGTTCTTAAGAAGAAGACTATGTAGCCCACCTGTTTTGGGACAGAACTCTATTTCTATATTTTTTAATGCATATTTTTTTCCTCTGAAAAACCTACTGTAATTTTGTTTGTTGTACTTTCCCCAAACATTTTCTTACTTATTGTGTAGAAATATAGAGCTGTAAATTCAGACTAAAATGCTCAAGATATTGTGGTTGATTTTGAGAGATTAATTATATTGATTTACTTTTTGTTACATTTTTCTGGTGTTTATTTTTTATATGCTTGGCAAATGTAGTGTGACTTTTGTGTGCAATATAACAAGACCACAAGGAAAAATGTCGGTTATCGTCGCCAATCAATCTTTGTGGCCAAGCGTCTTTACCATTCTTAATCTATATCTAGATTCAGTTTTAACTAAGTTGCCTTGTACTATTACTATTTTATGTGCGTTTGACATTTTGTAAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTCACATACTTTTAACTTTTCTATGTGAAGTACATTATTAGGATTTGCTTTTGTTGTTTTTACTTGTTTGCCATTTTCTACAGCATTATTCCTTAACCAACAAGAGTTCTAAAATGTTTGCTAAATTATTTTTAACATTTTCAAGTGCAGGATACTAAACTTGACTTTTGTTCATATACCTACAAACATTCCCCATTGCCTGAGATTGTAACAAAGCTATTGTTACACATTATTTATATATTACAACATTTATCATAATGTAACAAAGAAATGTGCCCTCTTTTCACTGTCCACCTGAACCAACATGCTGCAACAATTACAATTCATATTATATGTGCATTCATTCAAATTCAAAAGTTTTAAATAGCTTGACAATCCCTTGGTTTTCACACATTTTTTCTCGTGTCACTTGGTTTCATATTTGACAGACCTTGTTCATAGATGTTTTCATAAAGTACATTTGTATGATAACTGGAATGTGCCTAATAAATTTTGTAAAATAAAAGGTAATCAAACTTGTTTTATCTTCCTGAAAATTCTTGTTAATCTAAATGCTAT

Function

symbol description
cisd2 Predicted to enable 2 iron, 2 sulfur cluster binding activity and protein homodimerization activity. Predicted to be involved in autophagy of mitochondrion; multicellular organism aging; and regulation of autophagy. Predicted to act upstream of or within autophagy. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in mitochondrial outer membrane. Human ortholog(s) of this gene implicated in Wolfram syndrome 2. Orthologous to human CISD2 (CDGSH iron sulfur domain 2).

GO:

id name namespace
GO:0010259 multicellular organism aging biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_08452153_08453389.mRNA False 2189 mRNA 0.35 3 8451210 8454233
TU239618 True 1480 TUCP 0.34 3 8451142 8453450

Neighbor

gene id symbol gene type direction distance location
CI01000049_08232963_08241161 NA coding downstream 209958 8231960 ~ 8241252 (-)
CI01000049_08161528_08162817 NA coding downstream 285552 8161050 ~ 8165658 (-)
CI01000049_08144659_08148556 NA coding downstream 302539 8143943 ~ 8148671 (-)
CI01000049_08116401_08122069 CABP2 coding downstream 327965 8116401 ~ 8123245 (-)
CI01000049_08073333_08087714 CTNND1 coding downstream 363496 8072960 ~ 8087714 (-)
CI01000049_08789547_08818204 DKFZP459D223, CTNNA2 coding upstream 334673 8788906 ~ 8818620 (-)
CI01000049_08830382_08866592 NA coding upstream 375577 8829810 ~ 8866592 (-)
CI01000049_08933235_08933525 NA coding upstream 478567 8932800 ~ 8933535 (-)
CI01000049_09118560_09206979 CTNNA2.S, CTNNA2 coding upstream 663986 9118219 ~ 9207463 (-)
CI01000049_09258155_09261544 NA coding upstream 803154 9257387 ~ 9262131 (-)
G211461 NA non-coding downstream 17972 8432726 ~ 8433238 (-)
G211208 NA non-coding downstream 23711 8363019 ~ 8427499 (-)
G211427 NA non-coding downstream 115424 8332584 ~ 8335786 (-)
G211418 NA non-coding downstream 155687 8295295 ~ 8295523 (-)
G211411 NA non-coding downstream 181930 8268996 ~ 8269280 (-)
G211475 NA non-coding upstream 34794 8489027 ~ 8489254 (-)
G211476 NA non-coding upstream 35589 8489822 ~ 8490041 (-)
G211524 NA non-coding upstream 147473 8601706 ~ 8604631 (-)
G211536 NA non-coding upstream 184326 8638559 ~ 8638822 (-)
G211539 NA non-coding upstream 207793 8662026 ~ 8708564 (-)
CI01000049_08056071_08059039 TIMM10.S, TIMM10, TIMM10.L other downstream 392031 8055633 ~ 8059179 (-)
G209491 NA other downstream 2422797 6028089 ~ 6028469 (-)
G207278 NA other downstream 6462443 1987011 ~ 1988767 (-)
G206938 NA other downstream 7623565 825859 ~ 827645 (-)
G206850 NA other downstream 7818015 632680 ~ 633195 (-)
G211175 NA other upstream 11060 8465293 ~ 8476265 (-)

Expression


Co-expression Network