CI01000051_00638200_00720543 (CDC42BPB)


Basic Information

Item Value
gene id CI01000051_00638200_00720543
gene name CDC42BPB
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 637590 ~ 720669 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

Function

symbol description
cdc42bpb Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in actomyosin structure organization and peptidyl-threonine phosphorylation. Predicted to act upstream of or within several processes, including actin cytoskeleton organization; intracellular signal transduction; and protein phosphorylation. Predicted to be located in lamellipodium. Predicted to be active in cytoplasm and cytoskeleton. Orthologous to human CDC42BPB (CDC42 binding protein kinase beta).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K16307 CDC42BP; serine/threonine-protein kinase MRCK

RNA

RNA id representative length rna type GC content exon number start site end site

Neighbor

gene id symbol gene type direction distance location
CI01000051_00514656_00517593 ENPP5 coding upstream 120186 513815 ~ 518014 (+)
CI01000051_00487642_00497395 CCM2 coding upstream 139890 487642 ~ 498310 (+)
CI01000051_00414617_00476423 XKR6B, XKR6 coding upstream 161777 414617 ~ 476423 (+)
CI01000051_00194573_00205676 NA coding upstream 432465 193827 ~ 205735 (+)
CI01000051_00147585_00164301 NA coding upstream 473151 147585 ~ 165049 (+)
CI01000051_00729622_00743172 NA coding downstream 9079 729622 ~ 743240 (+)
CI01000051_00750280_00751344 GPR132B coding downstream 29615 750158 ~ 753843 (+)
CI01000051_00775546_00780498 PSMA8 coding downstream 54831 775374 ~ 780557 (+)
CI01000051_01171125_01232233 NA coding downstream 450466 1171009 ~ 1232563 (+)
CI01000051_01335061_01337004 NA coding downstream 614009 1334552 ~ 1339091 (+)
G217235 NA non-coding upstream 37143 600805 ~ 601057 (+)
G217227 NA non-coding upstream 50934 586940 ~ 587266 (+)
G217216 NA non-coding upstream 77768 556848 ~ 560432 (+)
G217202 NA non-coding upstream 106499 531431 ~ 531701 (+)
G217200 NA non-coding upstream 108272 529718 ~ 529928 (+)
G217253 NA non-coding downstream 11099 731642 ~ 734486 (+)
G217281 NA non-coding downstream 101699 822242 ~ 864620 (+)
G217307 NA non-coding downstream 170309 890852 ~ 891354 (+)
G217318 NA non-coding downstream 192270 912813 ~ 974986 (+)
G217308 NA non-coding downstream 294272 1014815 ~ 1017172 (+)
G217075 NA other upstream 254072 324465 ~ 384128 (+)
CI01000051_02060996_02061735 NA other downstream 1339444 2060534 ~ 2062355 (+)
G218981 NA other downstream 2524900 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 3653867 4372658 ~ 4393677 (+)
G219803 NA other downstream 4194431 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 6105256 6825895 ~ 6830637 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location