CI01000051_01789888_01790134


Basic Information

Item Value
gene id CI01000051_01789888_01790134
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1789761 ~ 1790134 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_01789888_01790134.mRNA
ATGACCTTTTATGTCCTGCTGTTGATGTTGGTTCTGCTGATGTCATTGTGGGTGTGCATGTTGTTTCTGCTTCTTTCAAATCACTTTGATGTCAAAGTTGAGAATGTGACAGTTATATCAGCCTCCCGAGATCCTGGAGACAAGATGTCTAAATGGTTCTCCTTAACATCGGATTTACTTCATTAAGCTTGTAAGGGAAAACATAATCAAGAGTCTGAGGCCATCCAGTCAGCGCTGAATAACACAAGGCTTAGCACACTTCCACATTCCTTTATTCAGAAAAACAAGGTCATTTGGTAAGGTTGTTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_01789888_01790134.mRNA True 313 mRNA 0.40 2 1789761 1790134

Neighbor

gene id symbol gene type direction distance location
CI01000051_01785489_01787612 IGFBP1A coding downstream 2057 1784416 ~ 1787760 (-)
CI01000051_01716468_01720230 NA coding downstream 68853 1716459 ~ 1720908 (-)
CI01000051_01644907_01652696 MCM3L, MCM3 coding downstream 137042 1644800 ~ 1652719 (-)
CI01000051_01560871_01627451 TRAPPC8 coding downstream 162096 1560828 ~ 1627665 (-)
CI01000051_01528013_01535266 OPN7A coding downstream 254495 1527909 ~ 1535266 (-)
CI01000051_01809480_01841801 ADCY1A coding upstream 19346 1809480 ~ 1841801 (-)
CI01000051_01852579_01861297 NA coding upstream 62290 1852424 ~ 1861883 (-)
CI01000051_01894807_01902190 SIRT5 coding upstream 104185 1894319 ~ 1902190 (-)
CI01000051_01915943_01920786 NA coding upstream 125240 1915374 ~ 1920786 (-)
CI01000051_01926867_01942055 DHCR24 coding upstream 136552 1926686 ~ 1942055 (-)
G218613 NA non-coding downstream 865 1788326 ~ 1788896 (-)
G218471 NA non-coding downstream 26850 1707837 ~ 1762911 (-)
G218578 NA non-coding downstream 98467 1691054 ~ 1691294 (-)
G218454 NA non-coding downstream 100550 1688421 ~ 1689211 (-)
G218617 NA non-coding upstream 6378 1796512 ~ 1796923 (-)
G218621 NA non-coding upstream 10743 1800877 ~ 1801108 (-)
G218629 NA non-coding upstream 73983 1864117 ~ 1864351 (-)
G218630 NA non-coding upstream 76305 1866439 ~ 1866639 (-)
G218468 NA non-coding upstream 102711 1892845 ~ 1893626 (-)
CI01000051_00560810_00563417 NA other downstream 1222606 560768 ~ 563417 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 1383966 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 1507132 278192 ~ 304373 (-)
CI01000051_00224709_00227613 NA other downstream 1546735 224507 ~ 227613 (-)
G218728 NA other upstream 737209 2527343 ~ 2546459 (-)
G218861 NA other upstream 1050136 2840270 ~ 2840632 (-)
CI01000051_02955633_02960400 SCRN2 other upstream 1169454 2955380 ~ 2961148 (-)
G220041 NA other upstream 2365596 4155730 ~ 4158103 (-)
G221575 NA other upstream 3723818 5513952 ~ 5518824 (-)

Expression


Co-expression Network