CI01000051_02561929_02569617


Basic Information

Item Value
gene id CI01000051_02561929_02569617
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 2561077 ~ 2570235 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_02561929_02569617.mRNA
AGAGTTTTTTCACGTCATATCACACGTGGTGTCAAGTGCCTTTTGGAGCAGGAGCCTCCTGCTGTCTGTAGGTTTCACCCAGCTGATAGCTGCGGCCCGGGGAGATTAACCTATATCTGTTAGCACTAACCCTCATGCTCCTCATCGTTGCAATTGTATTTACTCATTAGGCGTCATAGAAACAATGCTGAAGAGTTAATTAGAGAGCGAGCAGCTTGCATTCTGCCTTCTCTGACCCAGTTCTTTTTCCTTCTCTCCTCCTCCCTCCCTCTTTTTCTTCTTCTTCCTTGTCTCTATCCTGGTTAATGAGCGCACTTCATGGTATGAAATGGTTGCATGATTATTTTCACATGATTCTGACTGAGTCGTGATTAAAAGGCAATTTCTTCCTTTTGTGTGCTCGTTCATTCTGTAAACGTCAGGACTCGGGTTTGATTTCTCTGCTTTTCATCCAGAGAAATGTGAGAATGTGTTTATAATAAGGCTTTGCTGCACCAAATGGAGGTCGTAATGCAGTGTGAATGATAATAGTGGTCAACCTAGGTCATAACATTCTTCTTAGATGGCTAAAAAACTCACTGTGATCTGTCGAGAAGTGTTTGGCAGACCAATGAGGTGATGTCCACACCAGTCTTTTCATCCTTAATGACTTACTTTGCCATACCTTCCTCCTGTCCCATGACTCCTGGCTTTGCCTTAATAATGATCTCACACCAGCATGGGTGTGATCAGGGCCGATATGGCATTCTAATGAAAGGCCAGGAGAATTTCTCAAAGGTTGGAGTAATGGGTGACTTGACAGGCTCTTTATGTAACAATCATAGGTGGATTTTGGGAGGCAGGGTATTTTACCCACCACTTTTGAGCTTTATTATGGAAACCAGATGTGGAGAAGCAGTGCCAAGTTCTTTAGCTCAAGAAGAGTTGACAGGGAGGGATGGCGGGAAGAAAGTGGGAGGATGGGCTGCTATATGCTTGGATGGTGGAGAGGGGGAGGGGTGCGCTGGATTAAAATCTTGGTCGAAAACATCCGCATTAAAAAACAGAGGCAATGAAATAAACATCCCACCACCGAATGAGAAGACAAGTAGAGATAGCAGAGAGAGAAAATGGTCTGTAAAAGATGAGCAGAAATGGGGAAAATGAGAAAAGTGAGTCAGAGTGAAGTGAAATCAACTGAAAACAGGACATGGATTCTGTGGAGGGAAAACTGGTGATGAGATTCTGGCAGCAAAATGAGTTTAGAACAACAAAACCCTCCACCAAACCACAAAGAGAGAGATAAAGAGAGAAAGGGTAATGGTAATGTAGTACATATTATGTATTGAGACACATATAAAACAAACAGATGTACAAAAAAACTTAATATCAGCACACAGGCTTTTCCAGCTGTCTGTGATTACTGGATAAGAATTTTAAAAATCATTTTAAAGCGATTGCGCTCACAAAGTACAACCTTTCAGATATTCAGAGCTTAGCACAATGAGAAAAAATGTACTTACTGTGGAAATATAATATGATTTTTAAAGATTTTATTAATTTCACCTGTCCCACCAGCAAATTATATATATATATATATATATTTGTTTGTTTGCCATTAAAAATAACTAAACACCCTTGAAAACAAGCTTAATTTGCCTGGTCTGCATGAAAGCATGAGATGTTAAGAATGTTTTTCAGGTAAAGTTTTTTAAAAATTAATTTTAATTTAAATGTAATTTATTGCTGTGATGCAAAGCTGAATTGTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCTGATTTGGTGCTGAAGTAACATCTCTTATTATTATCAATGTTGAAAATGGGTGTGATGTTTAATATTTTTATGAAAGCCTTTACATTTTTTTCAGGAGTCTTTGATGAAAGGTCAAAAGAATAGCATTTATTTGAAACAGAATTTTTTTGTAACAATTTACAAGTTCCACTATCACTTCATTGCTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_02561929_02569617.mRNA True 1998 mRNA 0.38 4 2561077 2570235

Neighbor

gene id symbol gene type direction distance location
CI01000051_02391113_02451758 NA coding downstream 109319 2389882 ~ 2451758 (-)
CI01000051_02362692_02367269 NA coding downstream 193808 2361767 ~ 2367269 (-)
CI01000051_02359343_02360115 NA coding downstream 200962 2359091 ~ 2360115 (-)
CI01000051_02297468_02301682 PLPP3 coding downstream 258683 2296901 ~ 2311967 (-)
CI01000051_02148607_02152701 NA coding downstream 407652 2148469 ~ 2153425 (-)
CI01000051_02918395_02918916 NA coding upstream 348081 2918316 ~ 2918916 (-)
CI01000051_02920005_02939882 NA coding upstream 349222 2919457 ~ 2939882 (-)
CI01000051_02941319_02952102 NA coding upstream 371077 2941312 ~ 2952102 (-)
CI01000051_02955633_02960400 SCRN2 coding upstream 385145 2955380 ~ 2961148 (-)
CI01000051_02966203_03000592 NA coding upstream 393936 2964171 ~ 3000592 (-)
G218765 NA non-coding downstream 34899 2490790 ~ 2526178 (-)
G218823 NA non-coding downstream 37502 2522859 ~ 2523575 (-)
G218748 NA non-coding downstream 165300 2392411 ~ 2395777 (-)
G218716 NA non-coding downstream 206933 2350481 ~ 2354144 (-)
G218734 NA non-coding downstream 244351 2312097 ~ 2316726 (-)
G218829 NA non-coding upstream 8742 2578977 ~ 2579265 (-)
G218831 NA non-coding upstream 12976 2583211 ~ 2583426 (-)
G218848 NA non-coding upstream 114504 2684739 ~ 2684995 (-)
G218881 NA non-coding upstream 304388 2874623 ~ 2874876 (-)
G219958 NA non-coding upstream 332802 2903037 ~ 2903280 (-)
G218728 NA other downstream 14618 2527343 ~ 2546459 (-)
CI01000051_01785489_01787612 IGFBP1A other downstream 773317 1784416 ~ 1787760 (-)
CI01000051_00560810_00563417 NA other downstream 1993922 560768 ~ 563417 (-)
CI01000051_00394082_00407612 MTMR9 other downstream 2155282 392720 ~ 407612 (-)
CI01000051_00278614_00302552 NA other downstream 2278448 278192 ~ 304373 (-)
G218861 NA other upstream 270035 2840270 ~ 2840632 (-)
G220041 NA other upstream 1585495 4155730 ~ 4158103 (-)
G221575 NA other upstream 2943717 5513952 ~ 5518824 (-)
G221840 NA other upstream 3562538 6132773 ~ 6133579 (-)

Expression


Co-expression Network