Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000051_03107566_03109607 |
| gene name | ITPA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 3107566 ~ 3109730 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| itpa | Predicted to enable nucleoside-triphosphate diphosphatase activity. Predicted to be involved in nucleoside triphosphate catabolic process. Predicted to act upstream of or within nucleotide metabolic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including anemia (multiple); developmental and epileptic encephalopathy 35; hepatitis C; rheumatoid arthritis; and thrombocytopenia. Orthologous to human ITPA (inosine triphosphatase). |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K01519 | ITPA; inosine triphosphate pyrophosphatase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000051_03107566_03109607.mRNA | True | 672 | mRNA | 0.47 | 7 | 3107566 | 3109730 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_03038457_03041581 | PIGC | coding | upstream | 64833 | 3036852 ~ 3042733 (+) |
| CI01000051_03022303_03035625 | TMED5 | coding | upstream | 71711 | 3021494 ~ 3035855 (+) |
| CI01000051_03014282_03014572 | NA | coding | upstream | 92805 | 3013677 ~ 3014761 (+) |
| CI01000051_02332216_02342649 | PRKAA2 | coding | upstream | 764353 | 2332216 ~ 2345195 (+) |
| CI01000051_02285060_02291993 | NA | coding | upstream | 815293 | 2284139 ~ 2292273 (+) |
| CI01000051_03128080_03133290 | NA | coding | downstream | 18350 | 3128080 ~ 3133321 (+) |
| CI01000051_03147600_03152676 | MYOC | coding | downstream | 37504 | 3147234 ~ 3153094 (+) |
| CI01000051_03431193_03432454 | JUN | coding | downstream | 320561 | 3430291 ~ 3432788 (+) |
| CI01000051_03435613_03439371 | NA | coding | downstream | 325883 | 3435613 ~ 3439851 (+) |
| CI01000051_03443548_03451188 | NA | coding | downstream | 333818 | 3443548 ~ 3451814 (+) |
| G219015 | NA | non-coding | upstream | 9777 | 3096824 ~ 3097789 (+) |
| G218992 | NA | non-coding | upstream | 34270 | 3071293 ~ 3073296 (+) |
| G218989 | NA | non-coding | upstream | 54782 | 3051880 ~ 3052784 (+) |
| G218988 | NA | non-coding | upstream | 56682 | 3050682 ~ 3050884 (+) |
| G218987 | NA | non-coding | upstream | 57121 | 3050219 ~ 3050445 (+) |
| G219019 | NA | non-coding | downstream | 13967 | 3123697 ~ 3123940 (+) |
| G218967 | NA | non-coding | downstream | 53005 | 3162735 ~ 3163345 (+) |
| G219028 | NA | non-coding | downstream | 86959 | 3196689 ~ 3196900 (+) |
| G219029 | NA | non-coding | downstream | 87255 | 3196985 ~ 3197298 (+) |
| G219040 | NA | non-coding | downstream | 110443 | 3220173 ~ 3224648 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 1041483 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 2382862 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 2723438 | 324465 ~ 384128 (+) |
| G218981 | NA | other | downstream | 135713 | 3245443 ~ 3246873 (+) |
| CI01000051_04374052_04393328 | NA | other | downstream | 1264680 | 4372658 ~ 4393677 (+) |
| G219803 | NA | other | downstream | 1805244 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 3716069 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 4232311 | 7342041 ~ 7342546 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_017204 | itpa | coding | NC_007131.7 | CM002904.2 | 14941264 ~ 14949443 (+) |
