CI01000051_03457204_03459579


Basic Information

Item Value
gene id CI01000051_03457204_03459579
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 3456959 ~ 3459924 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_03457204_03459579.mRNA
ATTTATAAAACATCTATCCTATACACAAGTGAGCGTGACAGAATGAAGGAATGGATCAGAAGCAGAGTGAGATAGTGAGTGAGATAGACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGTGGGTGGGAAGTCTTAACCACACTGCAGGACCTTTTTAAAACTGATGTTCAGCAACAACTTTTTCAAGACATACTCTCTTGTTGTTCACACCTTCACACACTCTTCTGAGCTTTGCAAGCATGAGCAGTAACTTTGGCCACCCGTCCCAACCGGTGTTCATGGTGGATTCTGGCGGAGGTCATCCTAAACAGCAACGGTACTACCAGCAGCAGGTGCCCAGACACACAGAGCATGTGCCCAGACACACAGAGCCACCCCTGGTACCTTGCTGGACGTTCCCCCCTGCCCGAGCGGAGATGAAGAAAAGGAGCTGGGGAAGGTTGAATGGTGGGATGGCCTGGGTACTGACTTTGATACTCCTGCTGGTTTTTGCAGCCCTGGCACTGGGAGCCTATCAGATCCTGAGGTTACAGTCTGAAGTGGAGCGCCTGACACAGGAAATGCCCGCACAAATGCAGAGCGTTGCTCCACAGAAACAAGTTGGCCTGAATCCTGCTGAGCTGAACAAGAACAAAAGAAAATTTGCTGCACACTTAATAGGCCGTGCAGACCAGGGCCCAGCATCTGGAACTCTGATATGGGAAATAAAACATGGCGAGGTCTTTATAGAAGGCTTCAAGTACAGCAATGGCGGCCTCCAGGTCAATGAAAGCGGTTTGTACTTCGTTTACTCCCGAGTGGAGTTTCTTTCACCCACGTGCAAATCCGCAGACTATCACGCTCACAAAATGATTCGGCAGAGAGGCGGCCATACCCAAGTAATAATGGAAGATCACCAAGAGGGTCTCTGTACGCCGGGGACAAACGAGCCGTGGATGATGGGAAGCCATCTAGGCTCCCTTCAGCATCTCAAGGAGTCCGACTGGCTGTTTGTCAATGTCTCACACCGCCATCTGCTCAGCAAAAATTTTCACAACAATTATTTTGGCCTCTTCAAGATCCACTGATCATAGAGGACAACTAGGCGATGCTTACGAAGGGCATGATTGTGAGTTCAGATAAGGAGATCAGCAGTCTTTGGACTATAATCAACCCTGAGATCCTTACCGCTTCATGCATTCATTGCAATGCATCAATCAAATTTAATTTTGAATGTATTAGTTGCCTGTTCTTTTCTTTTAGAAAGTCATGCAGAAGAATTTCAGATTAAATGAACACTAATATGCTTCTGTATCAGGAGAAGGTAAATTAAATAAAAATATTTATGGTCCTTAAAGTCTGATTGTATATTAATGTGATCAATGGTCATATTGACTGAATAATATATCAATAATGCCTCATAAATGTGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_03457204_03459579.mRNA True 1418 mRNA 0.46 4 3456959 3459924

Neighbor

gene id symbol gene type direction distance location
CI01000051_03443548_03451188 NA coding upstream 5145 3443548 ~ 3451814 (+)
CI01000051_03435613_03439371 NA coding upstream 17108 3435613 ~ 3439851 (+)
CI01000051_03431193_03432454 JUN coding upstream 24171 3430291 ~ 3432788 (+)
CI01000051_03147600_03152676 MYOC coding upstream 303865 3147234 ~ 3153094 (+)
CI01000051_03128080_03133290 NA coding upstream 323638 3128080 ~ 3133321 (+)
CI01000051_03679568_03682342 NA coding downstream 219513 3679437 ~ 3682528 (+)
CI01000051_03687377_03698806 ANGPTL1A, ANGPTL1 coding downstream 227400 3687324 ~ 3698963 (+)
CI01000051_03800655_03819155 ZYG11B, ZYG11 coding downstream 340731 3800655 ~ 3819197 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding downstream 578483 4038407 ~ 4046528 (+)
CI01000051_04071144_04075444 KCNK13B coding downstream 611220 4070951 ~ 4077125 (+)
G219070 NA non-coding upstream 82834 3373888 ~ 3374125 (+)
G219052 NA non-coding upstream 121185 3335530 ~ 3335774 (+)
G219050 NA non-coding upstream 130298 3326054 ~ 3326661 (+)
G219048 NA non-coding upstream 133989 3322672 ~ 3322970 (+)
G219045 NA non-coding upstream 160415 3295998 ~ 3296544 (+)
G219163 NA non-coding downstream 75836 3535760 ~ 3536015 (+)
G219154 NA non-coding downstream 77263 3537187 ~ 3537679 (+)
G219191 NA non-coding downstream 115242 3575166 ~ 3576838 (+)
G219194 NA non-coding downstream 120290 3580214 ~ 3580535 (+)
G219203 NA non-coding downstream 133176 3593100 ~ 3593330 (+)
G218981 NA other upstream 210086 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 1390876 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 2732255 637590 ~ 720669 (+)
G217075 NA other upstream 3072831 324465 ~ 384128 (+)
CI01000051_04374052_04393328 NA other downstream 914486 4372658 ~ 4393677 (+)
G219803 NA other downstream 1455050 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 3365875 6825895 ~ 6830637 (+)
G221319 NA other downstream 3882117 7342041 ~ 7342546 (+)
G221386 NA other downstream 3949599 7401175 ~ 7413007 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017216 faslg coding NC_007131.7 CM002904.2 15600167 ~ 15605010 (+)