CI01000051_04419475_04464134


Basic Information

Item Value
gene id CI01000051_04419475_04464134
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 4419270 ~ 4464166 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_04419475_04464134.mRNA
CTATAAAAAAAAAAAAAACGTTTCTAACATGGATTCACATGTTAAAACTGTTAAAACTTTAGCATTTAAACCACCCTTTCAAATGCTTTCATTAAGTGCACTGCCCGGCAACAACTCACTTTAACATTTCATGACATATTCTGAAATGTTTCTTAGTCAGAACAAATGAATATTTCAGTTAGATTCATTTTTACCTGTGGAAAACATGAAGTCAAGTCTTTTACAGCCACCAACCGTCAGAGAGAACTCCAATCTGTTTTATGATAGCTTTCATTACACAGTCTTTAACTTCTTGCAGCCCTCCAGCTCCACAGGCATAACCACGGTCTCCTCATTCATTGTTCCACCTCCTCCACTGGTCACCCATGATCCACCGTGGTCTTCAAAGTGGTGGCCTCAGAGTTTTGACCCTCCTTCGGCTTCACCTCAGCCTTTCCGAGCCCATGACTCCACCTCAAACCTGCGCTTGAGCCCTCCACACTTTGGCTCCACCAGGGTCTTCCATCCCTCCATCTCCACCATTGTCCTCACTCCCACCGGCTCCACCTTGGTCTTCCAAGCCCCCAGTTCCACCTTGTCTTCCGATCCACCAGCTCCACCATGGTCAGTGATGCAGCGAGCTCCACCATGGATCCCCATCCCTCCAGCTTTGCCATGGTCTCCTCCTCCGCTAGCTCCTCCCATGGTGGTCTCCTCTTTAGCTGGCTCCTCCATGGAGGACCCCATCTCTGCCAGACCTCCAGAGGGGGCACCAGTTATTGACAAGATCTCTGAGAGGAGAAATCTTAAAAACCCAGAGCTGCTGAGAAAGAAGCTGCTGGAAAAGGAGCCTCAAGCCTCTTCAGTATACAACCCCAGCACCCATGCACCCGTGCATGTTAGCACCCAACAGGGAGCAGCAGTGCCCGCCAGGTCTCCACATGCAGCTTCAGTGTCCGCAGGGTCTCTGAAGGGTGCAGCAGTGCCTGCCCATACCACAAAGAGAAGAAAACGGAGGCTTGATGTGCAGCAATCACCTGGGTCTCATCAGGAAGCACTCATGCATGCCTGTGCTCCAGAGGGTGTACATGTGCCTGTGAACTTGACCCCATTCCTGCAGGGGACCCACGAGGGACCAGCAGTGCCCAGCAAGACCATGAAGCAGGGAAAACGTAGGATCCCTCACCATCTGAGGCAGCAGAAGCCCCAAGCCTCTTGTCCTTTGGCACAGACCCTTCTTGGAGCACCCATCTCTTCCCACCAAGGAGCACCCATGCCCAGTCGGAGGAAGAGGTTGTGTCCATGGAGCACAGAAGGTTCTGACAATGTAGGTCTGTGTCAAGCATCTTCACAGAAACTATGTATGGAAATTGACAACCTAATTGAAAAGACAGTGTATCTACAGTTTATCATGGTGGAAATGACACAACATGTGCTGCTGGAACACTTCCCAGAAACACGTTCTGAGGAGGAGTGGGAGGAGGTAATGGTCAGCTGTAAAGAAATAGGATTGAGTTTAATGGGATCTGTGAAAAGTGCTGGCCGTGTCACTGTGACAACGCTGAGTGTGCCACAGAGACAGCAACTCAAAGCTTTAAAGTTCTGCCAATGATTCCCTATAAAAGAGCTATCATGTCATTTGAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107675374

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_04419475_04464134.mRNA True 1623 mRNA 0.50 9 4419270 4464166

Neighbor

gene id symbol gene type direction distance location
CI01000051_04374052_04393328 NA coding upstream 25593 4372658 ~ 4393677 (+)
CI01000051_04155754_04157992 NFKBIAA coding upstream 260941 4155684 ~ 4158329 (+)
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding upstream 317754 4094354 ~ 4101516 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding upstream 333348 4081532 ~ 4085922 (+)
CI01000051_04071144_04075444 KCNK13B coding upstream 342145 4070951 ~ 4077125 (+)
CI01000051_04763063_04778692 NA coding downstream 298330 4762496 ~ 4779082 (+)
CI01000051_04796878_04799272 FLRT2 coding downstream 332712 4796878 ~ 4799321 (+)
CI01000051_05072860_05074568 GLRX5 coding downstream 608463 5072629 ~ 5074874 (+)
CI01000051_05126681_05142536 NA coding downstream 661585 5125751 ~ 5142617 (+)
CI01000051_05174862_05175926 NA coding downstream 709942 5174108 ~ 5176507 (+)
G219606 NA non-coding upstream 38848 4380125 ~ 4380422 (+)
G219598 NA non-coding upstream 54305 4364760 ~ 4364965 (+)
G219594 NA non-coding upstream 57671 4361394 ~ 4361599 (+)
G219591 NA non-coding upstream 63049 4355945 ~ 4356221 (+)
G219590 NA non-coding upstream 63441 4355578 ~ 4355829 (+)
G219662 NA non-coding downstream 87671 4551837 ~ 4552472 (+)
G219775 NA non-coding downstream 362099 4826265 ~ 4826468 (+)
G219798 NA non-coding downstream 429070 4893236 ~ 4894179 (+)
G219819 NA non-coding downstream 468177 4932343 ~ 4932850 (+)
G219835 NA non-coding downstream 520229 4984395 ~ 5046943 (+)
G218981 NA other upstream 1172397 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 2353187 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 3694566 637590 ~ 720669 (+)
G217075 NA other upstream 4035142 324465 ~ 384128 (+)
G219803 NA other downstream 450808 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 2361633 6825895 ~ 6830637 (+)
G221319 NA other downstream 2877875 7342041 ~ 7342546 (+)
G221386 NA other downstream 2945357 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 3641477 8209722 ~ 8214696 (+)

Expression


Co-expression Network