CI01000051_05126681_05142536


Basic Information

Item Value
gene id CI01000051_05126681_05142536
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5125751 ~ 5142617 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_05126681_05142536.mRNA
ATACAAAAGCCCCTGGGATGATTGTATGTTAGCCATAATTGCTTGGTCTAGAGGTATGTTTCTTGCTTTTGATGTGAAAAGTTGTAGGTTTAAAATCTCACTTACTGGTCCCACTTTATATTAGGTGTCCTTAACTATGTACATACATTTAAATTAATCATTTGATACAATGCACTTATTGTGTACACACATGTTTTTACATTGTACATATATTTTAAAAATACCTGCATGTAATTACATCTGTAATTAATTTCTGTAATTGCATTTATAATTACACTGTTGACCCATCCCTTACACCTTAAACCTACACATACCACCAAACCTGTCTCTAACCTTACCCGAATCCCAACTCAAATACAGCAAAACTGTTTTGCAATACAATATGAACACAATAAGTACATTTTACTTCTTTTTTGATGTAAGTACATAGTAGTTAAGGCCACCTAATATAAAGTGGGACCCACTTACCAAACAATCAACCAAAATTTAACCAAATATCTGTCAGTGGATATTAATGGGTGCATTGATGAAGTTATTAAGAGACGTACTGTATGTGAACTTACACACTTGAACATGTGAATGTCTGCAGCAGACATTTCTTTGCAATCAAATTTCAAATAAACAAATAAGTCTATAGTATACAAGACAATTAAATCTAAGAAAATTGCTTTGTTCCAATAAAACTACTCCAATAATAGACCATCAAGTTTTTATGAGGTGTTCTGGTCCTATTTCATAACACATCACTAAATAATATAGTTCATAGTTATTAAAATAGTTAAAATAACATAATTCATCATATTTCAACTTGTGAACAAACAGCCAAAATCCTTATTGGATATCTGTCTTCATTTACCTTGTAGAAATGAATGGGTAACTATAATTTTGATTTAGATTTGTTTTCTTTTTTGCTACACCACACACCAATATATGACAGATTGCAGACTGTATATGGGAAGCCCGTTTCCTGAGGTTATCACTGAGAAGAGAACATTCAGTTCCCCTTTTTTTCCTCCACAGATCCCTGTGATGACAGGAGCCTTCATGGACTCATCGCCTCACGATGACTACAGCACGGATCACTCTCTCTTCAACTCCTCTGCTAGCGTCCACGCCGCCGCTCTCGCAGCTCACAACCAACAGGAGGAGCAACAGCCCATGTCCCGAGATGCCATATGGCTGTGGATCGCCATCACCGCCACCATCGGAAATATTATAGTGGGGAGAGTGTCGACATCATACTTCCACACTATCGCTCACTATGTTAGAGGGGCAACTGGCGAGAAAAGATTTGTAACACATGCCATGTTCAACCACCGTTTTTCTCCACCTCAGGCTGTTGTCACACATGTAGGGACGTCTGCGACGGACTTAGATGCATTCCCTCCGATTAATCCTGTGAATCCTGCAGCTCGTCAGATCCATCAATCTCCCACATACTGTGTGCGTGGGATTGATGGCTCATTGCCGGGTTGTATCGGAGAGAACTGGAGGAGTCTGGCTCCAATTATCCCACAGATCTCAAAACAGCTGCATGTTGATGAATGGGTCCCACCTGTCACCTTCTGTTTGACATCACCTGGCAGCAACATCCGTGAGTCCACAGCTGCAAAAAGGCAGGAAACAAGAGGCACCGCTCATGCACTGGGTCTCCTGTGTGGCTGTTACCATAGAGACACTCAGATGGCAATTCATCCGCATCTAATTTCCTTCAACTTTAAGATGGTCGAGATGCTCCCTTAAGCAAACTGGAGGGAGATGAAACTCTGGAATCTCAAGGGTTGATTTGGGGTAACCTTAACATGCTACAAACAATCTCCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_05126681_05142536.mRNA False 1824 mRNA 0.40 6 5125751 5142617

Neighbor

gene id symbol gene type direction distance location
CI01000051_05072860_05074568 GLRX5 coding upstream 50877 5072629 ~ 5074874 (+)
CI01000051_04796878_04799272 FLRT2 coding upstream 326430 4796878 ~ 4799321 (+)
CI01000051_04763063_04778692 NA coding upstream 346669 4762496 ~ 4779082 (+)
CI01000051_04419475_04464134 NA coding upstream 661585 4419270 ~ 4464166 (+)
CI01000051_04374052_04393328 NA coding upstream 732074 4372658 ~ 4393677 (+)
CI01000051_05174862_05175926 NA coding downstream 31491 5174108 ~ 5176507 (+)
CI01000051_05254556_05270993 MEIS2B, MEIS2 coding downstream 111939 5254556 ~ 5271828 (+)
CI01000051_05296858_05301152 NA coding downstream 154067 5296684 ~ 5301334 (+)
CI01000051_05314994_05317995 ACTC1B, ACTA2, ACTA1, MGC53823, ACTC1, MGC75582, ACT3, ACTC1A, ACTA1A, ACT2, ACTC1.L coding downstream 171827 5314444 ~ 5318185 (+)
CI01000051_05320361_05322570 GJD2B, GJD2 coding downstream 177744 5320361 ~ 5323905 (+)
G219881 NA non-coding upstream 20604 5104922 ~ 5105147 (+)
G219880 NA non-coding upstream 21995 5103527 ~ 5103756 (+)
G219877 NA non-coding upstream 29551 5095978 ~ 5096200 (+)
G219806 NA non-coding upstream 53614 5071617 ~ 5072137 (+)
G219868 NA non-coding upstream 55843 5069684 ~ 5069908 (+)
G219895 NA non-coding downstream 2054 5144671 ~ 5144882 (+)
G220701 NA non-coding downstream 34721 5177338 ~ 5177567 (+)
G220725 NA non-coding downstream 56157 5198774 ~ 5198997 (+)
G220726 NA non-coding downstream 56788 5199405 ~ 5199684 (+)
G220727 NA non-coding downstream 59792 5202409 ~ 5202751 (+)
G219803 NA other upstream 73718 4914974 ~ 5052033 (+)
G218981 NA other upstream 1878878 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3059668 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 4401047 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 1683182 6825895 ~ 6830637 (+)
G221319 NA other downstream 2199424 7342041 ~ 7342546 (+)
G221386 NA other downstream 2266906 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2963026 8209722 ~ 8214696 (+)
G222727 NA other downstream 3200325 8342942 ~ 8343448 (+)

Expression


Co-expression Network