Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000051_05712567_05728993 |
| gene name | YLPM1 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 5712567 ~ 5729691 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| ylpm1 | Predicted to be involved in regulation of telomere maintenance. Predicted to be active in nucleus. Orthologous to human YLPM1 (YLP motif containing 1). |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K17602 | YLPM1; YLP motif-containing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000051_05712567_05728993.mRNA | True | 5444 | mRNA | 0.47 | 20 | 5712567 | 5729691 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_05657394_05672861 | SYT14B, SYT14 | coding | upstream | 38365 | 5657394 ~ 5674202 (+) |
| CI01000051_05588671_05593438 | RDH14B | coding | upstream | 118590 | 5588292 ~ 5593977 (+) |
| CI01000051_05579061_05584087 | CRIP2 | coding | upstream | 128480 | 5579061 ~ 5584087 (+) |
| CI01000051_05523573_05525861 | NA | coding | upstream | 185560 | 5523362 ~ 5527007 (+) |
| CI01000051_05514127_05516929 | ZFP36L1B, ZFP36L1 | coding | upstream | 194782 | 5512756 ~ 5517785 (+) |
| CI01000051_05757566_05757955 | C12ORF57 | coding | downstream | 27875 | 5757566 ~ 5758141 (+) |
| CI01000051_05831209_05933202 | DLGAP2 | coding | downstream | 101518 | 5831209 ~ 5933637 (+) |
| CI01000051_05935542_05939529 | NA | coding | downstream | 205752 | 5935443 ~ 5939632 (+) |
| CI01000051_05955881_05966250 | NA | coding | downstream | 225726 | 5955417 ~ 5966425 (+) |
| CI01000051_05969849_05970699 | NA | coding | downstream | 240158 | 5969849 ~ 5971469 (+) |
| G220922 | NA | non-coding | upstream | 35604 | 5676464 ~ 5676963 (+) |
| G220889 | NA | non-coding | upstream | 140830 | 5571458 ~ 5571737 (+) |
| G220861 | NA | non-coding | upstream | 189781 | 5521857 ~ 5522786 (+) |
| G220856 | NA | non-coding | upstream | 213908 | 5498104 ~ 5498659 (+) |
| G220850 | NA | non-coding | upstream | 222280 | 5490068 ~ 5490287 (+) |
| G220930 | NA | non-coding | downstream | 9888 | 5739579 ~ 5740171 (+) |
| G220916 | NA | non-coding | downstream | 11367 | 5741058 ~ 5744465 (+) |
| G220923 | NA | non-coding | downstream | 59837 | 5789528 ~ 5830106 (+) |
| G220920 | NA | non-coding | downstream | 215899 | 5945590 ~ 5946344 (+) |
| G220983 | NA | non-coding | downstream | 260115 | 5989806 ~ 5990114 (+) |
| G219803 | NA | other | upstream | 660534 | 4914974 ~ 5052033 (+) |
| CI01000051_04374052_04393328 | NA | other | upstream | 1337237 | 4372658 ~ 4393677 (+) |
| G218981 | NA | other | upstream | 2465694 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 3646484 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 4987863 | 637590 ~ 720669 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 1096108 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 1612350 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 1679832 | 7401175 ~ 7413007 (+) |
| CI01000051_08211233_08214513 | NA | other | downstream | 2375952 | 8209722 ~ 8214696 (+) |
| G222727 | NA | other | downstream | 2613251 | 8342942 ~ 8343448 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_017917 | ylpm1 | coding | NC_007131.7 | CM002904.2 | 9172301 ~ 9199721 (-) |
