CI01000051_07015896_07020569


Basic Information

Item Value
gene id CI01000051_07015896_07020569
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7015383 ~ 7020614 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_07015896_07020569.mRNA
GTATAAAGAACTTATTTTATATTACTTATGTTACCATACTTTTATACATAGTAAATGTTTTCATATATAGATGACCAAAATACTGCTGAACATGGCACATAATTCTTATTTACTTTACAATATAACACCGTATTACCTAAATAAAAAAGTAAACGAGATATCCCAAAGCGTAGCATGTTAAAAAAAAAAAAATGTCTCTTTATGATCATCATCTGTGCAATCATGCAATAGTGCCCCGCAGTGGTCAGTTCCTGAAGCGCAGGGAATTTTATTAGACAACAACAACACACAAGTAGCTTTACCAAGTGCTTCTTTAAGCAAACCACCAGTTGACTCTTGAATATAATGACAGAAAAAGATGTGATTATAATGCCTAAAAGTTGAATACAAAAGATGTGATGAAGAGACGTGACTGATTAAATCAATTATGCAAATGAAAGGCGTTATTAGAGGCTCAGGCAAGTCAAATTCAGCGTTCACAAACATTCTAAACCAGCTTGTACAGGATCCGGGATGTCTGCAAGAGTGATTTTCAGAGGGATAAAATACCTGCAGATTTTCACATGCTGGTTACAGTTGGTAGAGGACATGTATATACTGCTCTCCTCTCTGAAGGCAGCAGAGGAGAATCACAGGATGAGCAGACGGACAGAGTCATACCCTCTTCAAGACTTTGCTGCTGAGAAGTCTCAAGGAGATGGTGTGATGAGCCGCAGAAGGGTCTCTGTGAAAGACCTGGGCCAGGGTGACTGTCAGGGCTTTTTGTACAAAAGGAAGGAAAGCAAAGGGTTCTTGGGCTGGAGGTGGAAAAAGTTTTGGTTTGTGCTCAAGAAATGTTCGCTCTACTGGTACACATCCGACATTGCAGAGAAGGCCGAAGGCTACATCAACATGAGAGACTTCACCGTAGAACAGGCTGCCGAATGCAAGAAGAAGTTGTGAGTTTGTCTTCCTTATTTAGAGAGGTTTTTGACTGCTCGTGGTTTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_07015896_07020569.mRNA True 987 mRNA 0.40 5 7015383 7020614

Neighbor

gene id symbol gene type direction distance location
CI01000051_06985393_07011299 CNKSR3 coding upstream 3980 6983354 ~ 7011403 (+)
CI01000051_06970612_06971675 NA coding upstream 43541 6970422 ~ 6971842 (+)
CI01000051_06948569_06952962 NA coding upstream 61287 6948569 ~ 6954096 (+)
CI01000051_06917282_06944243 TTC13 coding upstream 71116 6917282 ~ 6944267 (+)
CI01000051_06898228_06901582 FAM89A coding upstream 113763 6898228 ~ 6901620 (+)
CI01000051_07081085_07109551 TIAM2 coding downstream 60471 7081085 ~ 7109606 (+)
CI01000051_07125875_07127476 CLDN20 coding downstream 105261 7125875 ~ 7127847 (+)
CI01000051_07170752_07194524 NA coding downstream 150138 7170752 ~ 7194524 (+)
CI01000051_07215332_07217167 NA coding downstream 194718 7215332 ~ 7217708 (+)
CI01000051_07253002_07255432 PTGFR coding downstream 231587 7252201 ~ 7255620 (+)
G221254 NA non-coding upstream 67488 6947384 ~ 6947895 (+)
G221208 NA non-coding upstream 103672 6847641 ~ 6911711 (+)
G221188 NA non-coding upstream 218777 6794991 ~ 6796606 (+)
G221194 NA non-coding upstream 221447 6785486 ~ 6793936 (+)
CI01000051_06655818_06730954 NA non-coding upstream 284098 6655818 ~ 6731285 (+)
G221256 NA non-coding downstream 23049 7043663 ~ 7152095 (+)
G221280 NA non-coding downstream 140552 7161166 ~ 7161367 (+)
G221283 NA non-coding downstream 186757 7207371 ~ 7207573 (+)
G221351 NA non-coding downstream 202103 7222717 ~ 7222987 (+)
CI01000051_06825895_06830637 NA other upstream 182315 6825895 ~ 6830637 (+)
G219803 NA other upstream 1963350 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 2640053 4372658 ~ 4393677 (+)
G218981 NA other upstream 3768510 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 4949300 2060534 ~ 2062355 (+)
G221319 NA other downstream 321427 7342041 ~ 7342546 (+)
G221386 NA other downstream 388909 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 1085029 8209722 ~ 8214696 (+)
G222727 NA other downstream 1322328 8342942 ~ 8343448 (+)

Expression


Co-expression Network