CI01000051_07873312_07878328 (PLPPR3B, PLPPR3)


Basic Information

Item Value
gene id CI01000051_07873312_07878328
gene name PLPPR3B, PLPPR3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7873077 ~ 7878627 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_07873312_07878328.mRNA
ATATTTAAGAAGCTATTTCTCATGTTACATTCATGGGCGTATCCAAATTTTTGTCCAATCAAATGCTCTCTAGAATAAATATGTGCCACTCCCTAATACCGCCTTCTGATTAGCATTAGCAAATAGCAAATCATGGTTCACGGCTGTGATGTGCAGTAAATAAACTGCACTTGTCTTTTCATGGGGTCTTTTAAATGAACTTGTCTTGACAGAATAACTTCAGAAGACCACCACCATGATGACTGCACGTGAAAAAATCAAGAAGAAACCGCCCAAAGACAGTTTGACGCTGCTACCCTGCTTCTATTTCGTAGAGGTACATGTCATCATTTATTACCAGTTTAATACTTCAATAGAGCAATTAATGTCTCAGCTACCCATTGTGGCGTCCTCCATGGTTTCACTGTACTTCCTGGAACTGACGGATGTGCTCCAGCCAGCGCAGGTGGGATTCCGCTGCCATGACCGTTCACTCAGCATGCCCTACGTGGACAGCGGCGACGAGCTCATCCCTCTGCTTATGCTCCTGAGTCTGGCATTTGCTGGCCCTGCTGCCTCTATCATGATGGGTGAAGGTCTGCTGTATTGTATGCAGTCCAAACTTAAAGTCCGTCCAGGGATTGAGGGAAGCATCAATGCTGGTGGATGTAATTTTAACTCTTTCCTGCGGAGAACTGTTCGTTTTGTTGGGGTTCATGTGTTTGGGCTTTGTGCAACAGCACTAGTTACTGATGTCATCCAGCTAGCCACTGGCTACCACACGCCATTCTTTCTCACAGTGTGCAAACCCAATTATACTGTCCCAGGTGTGTCCTGTGACAAGAACCCTTACATCACCAAAGACATTTGCTCTGGCCAGGATCAGCATGCTATTCTATCGGCCAGGAAAACCTTCCCTTCCCAGCATGCAACCCTCTCTTCCTTTGCTGCTGTTTATATTTCAATGTACTTCAACTCAACAATCTCAGATAGCACCAAGCTGCTCAAACCCGTTCTGGTGTTTGCCTTTGCCATTGCGGCTGCATTGACGGGACTCACTCAGATTACCCAGTACCGCAGTCACCCCATCGATGTGTATGTTGGGTTCTGTATTGGAGCTGGTATTGCTGCATACCTGGCTTTCCATGCTGTTGCCAACTTCAAATCTCCTGAGGACACTGTCATCCCGCAACCCCCTCCTCTGCAGAAGGATGCTTTAAGGGCTCTGGCCCAGCGAGGTCATGACTCTGTCTATAACAAAGGCCATGCCTCTGAAAGCAACGAGGAAATCACATCACCAGCATGTCTAGACGGGCTGAACCGGCCTGTACAGCGAGAGAAAACCTCATTGGGAAGCTTAAAGAGGGCCAGTGTGGACGTGGAGCTACTGGCACCTCGCAGCCCAATGGGTAAAGAGACCATGGTAACCTTCAGTAACACATTACCCCGTGCTACAGCTCCAGAGGAGCCAACGAGACGTCTGGTGACAGTACCTGTTCCTGTACCACTGGACCCAATGCGGTCACAGCAATTAGTATCTGAATGGAAGCAAAAGTCAATGGAGATGCGAGGTGGCAGCTTGCCCGATGAGGACACCAGCGAGCAGGGCTCAGACGGTGGTGATGACACGACCACAGAGGAGGACAGCGTCCATTCTTCAAACTATCCATCTGTTCCACAAACTACCAAACCAGTTAATCCACCTGCAGGTGCAAGAGTAGTAATGCCCCCTCGTCCCCCTGGACAGCCCTCAGTCCCCCCGCCTGTATCCCCTAAAAGCGCTAGCACTCGGGCCAAATGGCTGTCCATCACTGAGAAAAGTGGTGCTAATATTCCAGTTCTCAAGGCAGGGAATCAGCCTCGGATCATGCAGGTCATTGCCATGTCAAAGCAACAGGGACTCCTGTCTGGATCAGCAAAATCCTCTGAGACTTCGTCCTCTTCTGGTACCTCGTCCATCACGGGCACAGAATCATCACCCAATCGCTCAGAACGTGACAGCGGTTCAGGCATCATCACTGTTGATGCCCATGCCCCCCACCACCCTGTAGTTCGTATGACCTCCAATCCCAATAACCCCTGGGAGTGGAGAGGATCTTGTGATGGAAACATGGCTGAGTCGTATGAGCTCAAAAACCTCAACCGTGAGAGTTCCCGCGCTTACCGTCATGTCAGGAGCAGCTCTCCTTGTTCCTCTGTCAGTGAGGCTGACCACGGGCCGCCCCAGCCCCCTCAACCTCCCCAGCCACCACTTCCCCCTCAACTCCCACTTGTGGGTCAAACTTCAGAAGGTCGCAGTCTGCGTCGCAAGACCCCCCTAGTTTCGCTGGATAGGGAGGGCAATCAGAACCACACTGAACAGGAAAACTACTACAAAAAGCTACAAAGCGGCAGGCATTTTAAGGAGTGACAATGTGCTAACACTTTTTGGTCTTTTGGTTTTAAATACTTTATTTGATTCCATGAGGAATATCTGAATGACCAGATCCACTACACTTTGAGTCAGTAGAGCCTTCAGGAGATGCTGCTTCTGACAACTTAAGAGCACAATGGTATTGCCCTCTGAGGGTAAACCAGACTACATTATCAAAATTCCTCTCAGCTGTATTGTATTTACATAATCTTTATATTCTCAAATTCCTACAAGGCAGATTGTAAAATAAGGTTCTCTATTTATATTGCTGCTCTTTTTGTCCATACTTGACGTAA

Function

symbol description
plppr3b Predicted to enable lipid phosphatase activity and phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human PLPPR3 (phospholipid phosphatase related 3).
plppr3 Predicted to enable lipid phosphatase activity and phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0006644 phospholipid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_07873312_07878328.mRNA True 2688 mRNA 0.49 7 7873077 7878627

Neighbor

gene id symbol gene type direction distance location
CI01000051_07855788_07865402 MED16 coding upstream 7452 7855240 ~ 7865625 (+)
CI01000051_07806350_07831779 GRIN3B coding upstream 40743 7806350 ~ 7832334 (+)
CI01000051_07634084_07726089 NA coding upstream 146968 7633879 ~ 7726109 (+)
CI01000051_07611022_07612093 NA coding upstream 260984 7610449 ~ 7612093 (+)
CI01000051_07542167_07549737 ARRDC2 coding upstream 322417 7542167 ~ 7550660 (+)
CI01000051_07913334_07929103 PALM1A, PALM coding downstream 34707 7913334 ~ 7929182 (+)
CI01000051_07938052_07941645 MISP coding downstream 59065 7937692 ~ 7942111 (+)
CI01000051_07946087_07950464 NA coding downstream 67389 7946016 ~ 7951481 (+)
CI01000051_07954270_07957397 NA coding downstream 75643 7954270 ~ 7957559 (+)
CI01000051_07963621_07976671 PTBP1B, PTBP1 coding downstream 84994 7963621 ~ 7978209 (+)
G221333 NA non-coding upstream 32303 7804351 ~ 7840774 (+)
G221409 NA non-coding upstream 417540 7455331 ~ 7455537 (+)
G221408 NA non-coding upstream 421066 7451740 ~ 7452011 (+)
G221406 NA non-coding upstream 422187 7450479 ~ 7450890 (+)
G221530 NA non-coding downstream 117395 7996022 ~ 7996297 (+)
G221538 NA non-coding downstream 130288 8008915 ~ 8009351 (+)
G221539 NA non-coding downstream 137617 8016244 ~ 8016535 (+)
G221552 NA non-coding downstream 162990 8041617 ~ 8041854 (+)
G222631 NA non-coding downstream 345323 8223950 ~ 8224280 (+)
G221386 NA other upstream 460070 7401175 ~ 7413007 (+)
G221319 NA other upstream 530531 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 1040009 6825895 ~ 6830637 (+)
G219803 NA other upstream 2821044 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 3497747 4372658 ~ 4393677 (+)
CI01000051_08211233_08214513 NA other downstream 227016 8209722 ~ 8214696 (+)
G222727 NA other downstream 464315 8342942 ~ 8343448 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003346 plppr3b coding NC_007122.7 CM002895.2 14147913 ~ 14161975 (+)
bowfin (Amia calva) AMCG00006117 NA coding CM030142.1 CM030142.1 16627973 ~ 16637966 (-)