G217790


Basic Information

Item Value
gene id G217790
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 1155817 ~ 1156049 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU247061
ATCTCTGCAGTTCTCCAGCTGTGATCCTTGGAGAGTCTTTGGCCACTCAAACTTTCCTCCTCACCGCACATTAGGACGATTTAGACACACGTCCTCTTCCAGGCAGATTTGTAACATCTTTAGTTGATTGGAACTTCTCAATTATTGCCCTGATAGTGGAAATGGGGATTTTCAATGCTTTAGCTATTTTCTTACAGCCACTTTCTATTTTGTGAAGCTCAACAATCTTTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU247061 True 233 lncRNA 0.42 1 1155817 1156049

Neighbor

gene id symbol gene type direction distance location
CI01000051_00775546_00780498 PSMA8 coding upstream 375260 775374 ~ 780557 (+)
CI01000051_00750280_00751344 GPR132B coding upstream 401974 750158 ~ 753843 (+)
CI01000051_00729622_00743172 NA coding upstream 412577 729622 ~ 743240 (+)
CI01000051_00638200_00720543 CDC42BPB coding upstream 435274 637590 ~ 720669 (+)
CI01000051_00514656_00517593 ENPP5 coding upstream 637803 513815 ~ 518014 (+)
CI01000051_01171125_01232233 NA coding downstream 14960 1171009 ~ 1232563 (+)
CI01000051_01335061_01337004 NA coding downstream 178503 1334552 ~ 1339091 (+)
CI01000051_01367599_01369326 NA coding downstream 211390 1367439 ~ 1369436 (+)
CI01000051_01401065_01414909 NA coding downstream 243668 1399717 ~ 1415932 (+)
CI01000051_01419542_01436241 NA coding downstream 263000 1419049 ~ 1436331 (+)
G217775 NA non-coding upstream 21043 1134502 ~ 1134774 (+)
G217774 NA non-coding upstream 29261 1126350 ~ 1126556 (+)
G217345 NA non-coding upstream 129977 1024918 ~ 1025840 (+)
G217308 NA non-coding upstream 138645 1014815 ~ 1017172 (+)
G217318 NA non-coding upstream 180831 912813 ~ 974986 (+)
G217797 NA non-coding downstream 12768 1168817 ~ 1169056 (+)
G217812 NA non-coding downstream 21977 1178026 ~ 1178271 (+)
G217830 NA non-coding downstream 39401 1195450 ~ 1195702 (+)
G217845 NA non-coding downstream 62734 1218783 ~ 1219068 (+)
G217075 NA other upstream 771689 324465 ~ 384128 (+)
CI01000051_02060996_02061735 NA other downstream 903938 2060534 ~ 2062355 (+)
G218981 NA other downstream 2089394 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 3218361 4372658 ~ 4393677 (+)
G219803 NA other downstream 3758925 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 5669750 6825895 ~ 6830637 (+)

Expression


Co-expression Network