G218104


Basic Information

Item Value
gene id G218104
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 2059987 ~ 2066083 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU247408
AGTCCAGCCCGAGCCAGAGCCCGAGCCTAGGAAAGATGCGGCCACAAGCGATGCGACAGAGACCCCAAAAGTCAAAAGACCTAGTAATAACAGTGAGCTGCTTTTGTAAATAATGCAAGTTGTGTGCAAGTCACTGTATACTGCAAGTTCATCTGTAGAGAGTCTTAGCTTTACAGTGCTGCTGTTGAACATGTTGTGTTCGTCACTTATTTTTAAGCTAATGCAACCTGTTTCTTTTCCCGTTTCGGGATATTTGACGTGATCTCTTCCCAAAGAGAAGAATGCGTTTTGTATACAGTGACTAAACTGTGTCCGCGTCTCTAAATCTACTAAGCTGCCTACCCAGACTGCAATTTGGGGCATCATAGACATTTAGAATCCACATTTAATGCCCAGAAGTTCTGGCAGGGTAGGCAGCTCTCTAGGTTTAGGGACACTAAAAGTGTTTGCTGTCTGTAACAGATGAGGGAGGTGTGGAGACAGCAGAGGAGGCCACTGAACCCGCTGAACCAGATATCAACGAGCTCTGCAGAGACATGTTTGACAAAATGGCAGTTTTCTTACAGGGAGAGCTCACTGCCACCTGTGAGGACTACAAACTCCTCGAGAACATGAACAAACTCACCAGTCTGAAGTACATGGAGATGAAGGACATATCCATCAACATCAGCCGCAATCTGCAAGATCTCAATCAGAAATATGCCGGTTTACAGCCTTATCTGGATCAGATTAACCAGATCGAGGAGCAGGTTACGGCTCTGGAGCAGGCTGCATATAAACTAGACACATATTCAAAGAAACTAGAGGCCAAGTTTAAGAAACTGGAGAAGCGGTGAAAATGGCCTTCAGTATAGTCGTCCTCAAAATGTTACTCTGAGTTTGTTTGTTTTATGCACTAAACAATCTTCAGAAAGATATCACACACACACACACACACACATGTATGATACACACTATGGCATTGTCATAGTCTCTAGGTAATGGACTGTGCAGCAAGACAGCATTAATTCCCATACTGAATGCTCATTTATTGATCAAAAGATATGTTTTGGTTTTGGAAAATCTGGGCAAGACTGCAAAGAGCAGGAGTATAAAGTTTGACATGTGTTCATACTGACTCCTGATCTCAAAATACATATTTAAGATTTCAAAAGGCATGAATACAGATAAACCTGTACAGTGTATTTAAAATTGCTTGTTATATGTTGTTTAAGACTGTTTAACCATTATTTCTGTTTAAGAGTGACTTAATGACTTTTTGTATGTTTGCAGTTAGAAAAGTTTAATTATTTTCAAAATCTTAACTAACCTAACTAAAATGTCAATTTGTGAGCTTTTGGAATAAAAAAAATAAAAAAAAT
>TU247403
AGTCCAGCCCGAGCCAGAGCCCGAGCCTAGGAAAGATGCGGCCACAAGCGATGCGACAGAGACCCCAAAAGTCAAAAGACCTAGTAATAACAATGAGGGAGGTGTGGAGACAGCAGAGGAGGCCACTGAACCCGCTGAACCAGATATCAACGAGCTCTGCAGAGACATGTTTGACAAAATGGCAGTTTTCTTACAGGGAGAGCTCACTGCCACCTGTGAGGACTACAAACTCCTCGAGAACATGAACAAACTCACCAGTCTGAAGTACATGGAGATGAAGGACATATCCATCAACATCAGCCGCAATCTGCAAGATCTCAATCAGAAATATGCCGGTTTACAGCCTTATCTGGATCAGATTAACCAGATCGAGGAGCAGGTTACGGCTCTGGAGCAGGCTGCATATAAACTAGACACATATTCAAAGAAACTAGAGGCCAAGTTTAAGAAACTGGAGAAGCGGTGAAAATGGCCTTCAGTATAGTCGTCCTCAAAATGTTACTCTGAGTTTGTTTGTTTTATGCACTAAACAATCTTCAGAAAGATATCACACACACACACACACACACATGTATGATACACACTATGGCATTGTCATAGTCTCTAGGTAATGGACTGTGCAGCAAGACAGCATTAATTCCCATACTGAATGCTCATTTATTGATCAAAAGATATGTTTTGGTTTTGGAAAATCTGGGCAAGACTGCAAAGAGCAGGAGTATAAAGTTTGACATGTGTTCATACTGACTCCTGATCTCAAAATACATATTTAAGATTTCAAAAGGCATGAATACAGATAAACCTGTACAGTGTATTTAAAATTGCTTGTTATATGTTGTTTAAGACTGTTTAACCATTATTTCTGTTTAAGAGTGACTTAATGACTTTTTGTATGTTTGCAGTTAGAAAAGTTTAATTATTTTCAAAATCTTAACTAACCTAACTAAAATGTCAATTTGTGAGCTTTTGGAATAAAAAAAATAAAAAAAAT
>TU247404
TGCAAATGATCACATATGCATGCGTTTCATAATCATACCTCACTTTCCACGACGTCGTGATACGCTGGCGGAGGATCAAACCCTCCGGTGCCCGTGCGCCCGCTGTTCTCGCCGTCTCCACTGAGGCCGGAGCCCGGGGAAGTGCCGCTTTCCATCGGCTCGTAGCCGTATCCGAGTCCCGGGCTTTCGTTGGTGAGCAGCGCGACAGCCTCGTTGATGTCGTTTTTGGCCAGGCGCAGGGCTTTCCGGATGGCCACCGGGTCTGGGAAACCCATGCATAACAGCGTGGTCATATGCTGCTCCTCCTCTGTCTCCATCATGGAAGTGTGTCGATGATCGGGGCTTCAGTAAGGGGGCACATAGCACAGGCATCCGGCTGTGCATGCCGCCATGTTTACAGTCGGTGGTGGTGCTGGTATCCTGTCACGATGGATTCCCGTCACAGGCAGAGGGCAGCGGGGCTGAGAGCGGGCCACGCCAGGCCTGTGAAGCTAGCGACTCCAATGGCTAGATAGGTGGGTGTAGACTGGGATACTTTTCAAAATACAGTCCAGCCCGAGCCAGAGCCCGAGCCTAGGAAAGATGCGGCCACAAGCGATGCGACAGAGACCCCAAAAGTCAAAAGACCTAGTAATAACAATGAGGGAGGTGTGGAGACAGCAGAGGAGGCCACTGAACCCGCTGAACCAGATATCAACGAGCTCTGCAGAGACATGTTTGACAAAATGGCAGTTTTCTTACAGGGAGAGCTCACTGCCACCTGTGAGGACTACAAACTCCTCGAGAACATGAACAAACTCACCAGTCTGAAGTACATGGAGATGAAGGACATATCCATCAACATCAGCCGCAATCTGCAAGATCTCAATCAGAAATATGCCGGTTTACAGCCTTATCTGGATCAGATTAACCAGATCGAGGAGCAGGTTACGGCTCTGGAGCAGGCTGCATATAAACTAGACACATATTCAAAGAAACTAGAGGCCAAGTTTAAGAAACTGGAGAAGCGGTGAAAATGGCCTTCAGTATAGTCGTCCTCAAAATGTTACTCTGAGTTTGTTTGTTTTATGCACTAAACAATCTTCAGAAAGATATCACACACACACACACACACACATGTATGATACACACTATGGCATTGTCATAGTCTCTAGGTAATGGACTGTGCAGCAAGACAGCATTAATTCCCATACTGAATGCTCATTTATTGATCAAAAGATATGTTTTGGTTTTGGAAAATCTGGGCAAGACTGCAAAGAGCAGGAGTATAAAGTTTGACATGTGTTCATACTGACTCCTGATCTCAAAATACATATTTAAGATTTCAAAAGGCATGAATACAGATAAACCTGTACAGTGTATTTAAAATTGCTTGTTATATGTTGTTTAAGACTGTTTAACCATTATTTCTGTTTAAGAGTGACTTAATGACTTTTTGTATGTTTGCAGTTAGAAAAGTTTAATTATTTTCAAAATCTTAACTAACCTAACTAAAATGTCAATTTGTGAGCTTTTGGAATAAAAAAAATAAAAAAAAT
>TU247406
AGTCCAGCCCGAGCCAGAGCCCGAGCCTAGGAAAGATGCGGCCACAAGCGATGCGACAGAGACCCCAAAAGTCAAAAGACCTAATGAGGGAGGTGTGGAGACAGCAGAGGAGGCCACTGAACCCGCTGAACCAGATATCAACGAGCTCTGCAGAGACATGTTTGACAAAATGGCAGTTTTCTTACAGGGAGAGCTCACTGCCACCTGTGAGGACTACAAACTCCTCGAGAACATGAACAAACTCACCAGTCTGAAGTACATGGAGATGAAGGACATATCCATCAACATCAGCCGCAATCTGCAAGATCTCAATCAGAAATATGCCGGTTTACAGCCTTATCTGGATCAGATTAACCAGATCGAGGAGCAGGTTACGGCTCTGGAGCAGGCTGCATATAAACTAGACACATATTCAAAGAAACTAGAGGCCAAGTTTAAGAAACTGGAGAAGCGGTGAAAATGGCCTTCAGTATAGTCGTCCTCAAAATGTTACTCTGAGTTTGTTTGTTTTATGCACTAAACAATCTTCAGAAAGATATCACACACACACACACACACACATGTATGATACACACTATGGCATTGTCATAGTCTCTAGGTAATGGACTGTGCAGCAAGACAGCATTAATTCCCATACTGAATGCTCATTTATTGATCAAAAGATATGTTTTGGTTTTGGAAAATCTGGGCAAGACTGCAAAGAGCAGGAGTATAAAGTTTGACATGTGTTCATACTGACTCCTGATCTCAAAATACATATTTAAGATTTCAAAAGGCATGAATACAGATAAACCTGTACAGTGTATTTAAAATTGCTTGTTATATGTTGTTTAAGACTGTTTAACCATTATTTCTGTTTAAGAGTGACTTAATGACTTTTTGTATGTTTGCAGTTAGAAAAGTTTAATTATTTTCAAAATCTTAACTAACCTAACTAAAATGTCAATTTGTGAGCTTTTGGAATAAAAAAAATAAAAAAAAT
>TU247407
AGTCCAGCCCGAGCCAGAGCCCGAGCCTAGGAAAGATGCGGCCACAAGCGATGCGACAGAGACCCCAAAAGTCAAAAGACCTAGTAATAACAATGAGGGAGGTGTGGAGACAGCAGAGGAGGCCACTGAACCCGCTGAACCAGATATCAACGAGCTCTGCAGAGACATGTTTGACAAAATGGCAGTTTTCTTACAGGGAGAGCTCACTGCCACCTGTGAGGACTACAAACTCCTCGAGAACATGAACAAACTCACCAGTCTGAAGTACATGGAGATGAAGGACATATCCATCAACATCAGCCGCAATCTGCAAGATCTCAATCAGAAATATGCCGGTTTACAGCCTTATCTGGATCAGATTAACCAGATCGAGGAGCAGGTTACGGCTCTGGAGCAGGCTGCATATAAACTAGACACATATTCAAAGAAACTAGAGGCCAAGTTTAAGAAACTGGAGAAGCGGTGAAAATGGCCTTCAGTATAGTCGTCCTCAAAATGTTACTCTGAGTTTGTTTGTTTTATGCACTAAACAATCTTCAGAAAGATATCACACACACACACACACACACATGTATGATACACACTATGGCATTGTCATAGTCTCTAGGTAATGGACTGTGCAGCAAGACAGCATTAATTCCCATACTGAATGCTCATTTATTGATCAAAAGATATGTTTTGGTTTTGGAAAATCTGGGCAAGACTGCAAAGAGCAGGAGTATAAAGTTTGACATGTGTTCATACTGACTCCTGATCTCAAAATACATATTTAAGATTTCAAAAGGCATGAATACAGATAAACCTGTACAGTGTATTTAAAATTGCTTGTTATATGTTGTTTAAGACTGTTTAACCATTATTTCTGTTTAAGAGTGACTTAATGACTTTTTGTATGTTTGCAGTTAGAAAAGTTTAATTATTTTCAAAATCTTAACTAACCTAACTAAAATGTCAATTTGTGAGCTTTTGGAATAAAAAAAATAAAAAAAATTTAAATGCGAAGTGATTATTACTTATTTTGTAGTTTTTCTCCATCAATTTGACACATTTTTCCAAACTTAAGTCACTGCTCTGAAAACAATTATCTAAACACAAGAGAAAAAGTGTAATATTGTGCTCTAACAAATATGCCTCACATTTTCTATCTTAATTTTACATACTAATGATTTTGTGCAGTCATGATTATTTGGCAGCTTATGTTGGATGTTACTGATGGTATGGTCATGCAAATGTTGTGTGGGGCTTCATTTTATGTTTCAAACCGCTCTCTACACATCCACCACCAGAGGGCAGACTAAGCCCACACATAGTCCGACTCAACCTTTAACCTGAATTTGGCTATAACCCCAGTGATAGATTCAGGGCCATGTATGGTGAGGTGTTCA
>TU247409
TGCAAATGATCACATATGCATGCGTTTCATAATCATACCTCACTTTCCACGACGTCGTGATACGCTGGCGGAGGATCAAACCCTCCGGTGCCCGTGCGCCCGCTGTTCTCGCCGTCTCCACTGAGGCCGGAGCCCGGGGAAGTGCCGCTTTCCATCGGCTCGTAGCCGTATCCGAGTCCCGGGCTTTCGTTGGTGAGCAGCGCGACAGCCTCGTTGATGTCGTTTTTGGCCAGGCGCAGGGCTTTCCGGATGGCCACCGGGTCTGGGAAACCCATGCATAACAGCGTGGTCATATGCTGCTCCTCCTCTGTCTCCATCATGGAAGTGTGTCGATGATCGGGGCTTCAGTAAGGGGGCACATAGCACAGGCATCCGGCTGTGCATGCCGCCATGTTTACAGTCGGTGGTGGTGCTGGTATCCTGTCACGATGGATTCCCGTCACAGGCAGAGGGCAGCGGGGCTGAGAGCGGGCCACGCCAGGCCTGTGAAGCTAGCGACTCCAATGGCTAGATAGGTGGGTGTAGACTGGGATACTTTTCAAAATACAGTCCAGCCCGAGCCAGAGCCCGAGCCTAGGAAAGATGCGGCCACAAGCGATGCGACAGAGACCCCAAAAGTCAAAAGACCTAATGAGGGAGGTGTGGAGACAGCAGAGGAGGCCACTGAACCCGCTGAACCAGATATCAACGAGCTCTGCAGAGACATGTTTGACAAAATGGCAGTTTTCTTACAGGGAGAGCTCACTGCCACCTGTGAGGACTACAAACTCCTCGAGAACATGAACAAACTCACCAGTCTGAAGTACATGGAGATGAAGGACATATCCATCAACATCAGCCGCAATCTGCAAGATCTCAATCAGAAATATGCCGGTTTACAGCCTTATCTGGATCAGATTAACCAGATCGAGGAGCAGGTTACGGCTCTGGAGCAGGCTGCATATAAACTAGACACATATTCAAAGAAACTAGAGGCCAAGTTTAAGAAACTGGAGAAGCGGTGAAAATGGCCTTCAGTATAGTCGTCCTCAAAATGTTACTCTGAGTTTGTTTGTTTTATGCACTAAACAATCTTCAGAAAGATATCACACACACACACACACACACATGTATGATACACACTATGGCATTGTCATAGTCTCTAGGTAATGGACTGTGCAGCAAGACAGCATTAATTCCCATACTGAATGCTCATTTATTGATCAAAAGATATGTTTTGGTTTTGGAAAATCTGGGCAAGACTGCAAAGAGCAGGAGTATAAAGTTTGACATGTGTTCATACTGACTCCTGATCTCAAAATACATATTTAAGATTTCAAAAGGCATGAATACAGATAAACCTGTACAGTGTATTTAAAATTGCTTGTTATATGTTGTTTAAGACTGTTTAACCATTATTTCTGTTTAAGAGTGACTTAATGACTTTTTGTATGTTTGCAGTTAGAAAAGTTTAATTATTTTCAAAATCTTAACTAACCTAACTAAAATGTCAATTTGTGAGCTTTTGGAATAAAAAAAATAAAAAAAAT

Function

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0016607 nuclear speck cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU247408 True 557 TUCP 0.40 1 2065133 2065689
TU247403 False 649 TUCP 0.39 2 2060534 2065689
TU247404 False 1196 TUCP 0.46 2 2059987 2065689
TU247406 False 640 TUCP 0.39 2 2060534 2065689
TU247407 False 1043 TUCP 0.39 2 2060534 2066083
TU247409 True 1187 TUCP 0.46 2 2059987 2065689

Expression


Co-expression Network