G219044


Basic Information

Item Value
gene id G219044
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 3236188 ~ 3236417 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU248440
ATTTTTCATATGTCATAACATCAGTGGTTTGTGTTGTCTAAAAAAGACTAGGAGAAGAAAAAGAGGTCAGACGCTGATTCTTAAAGAACGGCCTCTCCGGTGTTAGATAACTTGCTGTTATAGCACCTCCTGCAGACAAACGCTTGTAACCTAAGTGTTGACTATAATTTTATTTAATTTTATTTCTTTATTTAGTGTATTGTATGTAAACTACTTAACCTGTAATTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248440 True 230 lncRNA 0.33 1 3236188 3236417

Neighbor

gene id symbol gene type direction distance location
CI01000051_03147600_03152676 MYOC coding upstream 83094 3147234 ~ 3153094 (+)
CI01000051_03128080_03133290 NA coding upstream 102867 3128080 ~ 3133321 (+)
CI01000051_03107566_03109607 ITPA coding upstream 126458 3107566 ~ 3109730 (+)
CI01000051_03038457_03041581 PIGC coding upstream 193455 3036852 ~ 3042733 (+)
CI01000051_03022303_03035625 TMED5 coding upstream 200333 3021494 ~ 3035855 (+)
CI01000051_03431193_03432454 JUN coding downstream 193874 3430291 ~ 3432788 (+)
CI01000051_03435613_03439371 NA coding downstream 199196 3435613 ~ 3439851 (+)
CI01000051_03443548_03451188 NA coding downstream 207131 3443548 ~ 3451814 (+)
CI01000051_03457204_03459579 NA coding downstream 220542 3456959 ~ 3459924 (+)
CI01000051_03679568_03682342 NA coding downstream 443020 3679437 ~ 3682528 (+)
G219043 NA non-coding upstream 146 3235688 ~ 3236042 (+)
G219041 NA non-coding upstream 3632 3231762 ~ 3232556 (+)
G219040 NA non-coding upstream 11540 3220173 ~ 3224648 (+)
G219029 NA non-coding upstream 38890 3196985 ~ 3197298 (+)
G219028 NA non-coding upstream 39288 3196689 ~ 3196900 (+)
G218956 NA non-coding downstream 433 3236850 ~ 3244568 (+)
G219045 NA non-coding downstream 59581 3295998 ~ 3296544 (+)
G219048 NA non-coding downstream 86255 3322672 ~ 3322970 (+)
G219050 NA non-coding downstream 89637 3326054 ~ 3326661 (+)
G219052 NA non-coding downstream 99113 3335530 ~ 3335774 (+)
CI01000051_02060996_02061735 NA other upstream 1170105 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 2511484 637590 ~ 720669 (+)
G217075 NA other upstream 2852060 324465 ~ 384128 (+)
G218981 NA other downstream 9026 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 1137993 4372658 ~ 4393677 (+)
G219803 NA other downstream 1678557 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 3589382 6825895 ~ 6830637 (+)
G221319 NA other downstream 4105624 7342041 ~ 7342546 (+)

Expression


Co-expression Network