G218981


Basic Information

Item Value
gene id G218981
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 3245443 ~ 3246873 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU248359
TCCAGTCTTTAGTGTCACATGATCCTTCAGAAATCATTCTAACGATGATTTGATGCTCCACAAACATTTATTGCTATCAATGTTGAAAACAGTTGAGATATATATTTATGTTCAGTATTTTTACTAAATAGAAAATAACATTTATTTGAATTTTTTTTTTTTTTTTATATATAACAATGTAAAAGTCTTTACTGTCACTTGATCAATTTGATGCGTCCTTGTTAAAGCACTAAATTTATAATAATTTATATATGTTTGATTAATTAGCAGTTCTATCCATGTATCCTAACATGACCTCAGAAAACAGTACTGCAAACAGTAATCCGACAATCCCCTGCACCACATGTAATATCCAATAGGTGGCAGTATAAGATCTCTGATTGAATCTCTCAAACAGCATTTCATACATGATACAGCAAAGGGTCAATGTTTGATTTTACAAGTTTACCAAGTCAAGTATTAAGATGACAAATTACATAACCGCCCTGTTGGTATGTTGTTGAACTTTCAAACCTTGTCGATCGACCCCAAAAAAGCTTCAAGGAATTATCAAACTGTGGCGCCAAACATCAATGCTGGGTGTCAATGAGGTATGAAAGGATGCCTTGTTATCACAAGCATTCCGTTTGTCCATTTAAAAACTGAAAAATTTTCCCACACAGGCACTTATCTAAGTAAATCATTGACACACAATCCTCATTCCTAGGCTGCCAGCAGGAAGCGCTCTCCTCGGCTTTGGCCCTGGGTTCTGAGAAGCAGGTGATAGTGACAGTGATGAGAGCGCAGGGACTAGCATGAGGTTTGGGTTACCACAACTATTCAGCCAACGTTACTGCAGCTCGTATAACCGGGTGAAGGTCATGGAAGCTATGCGGCTCGACGGCGAGGGCCAGATGCTCTTTTGCTTCAGAGTAGAGGACAGATTTCCTCTTTCTCCCTCCCTCCCCAAGAATGTTATGAAAACAGATAGGGATTCCCCTCATTGTCCAGTAAAATGCAGATGGTGTGTGTTTGATTGTGGAATGCCACGTCTCCGGCGCTACTGTTTCCGGGATGGGGGCCGGATGAGCCAATGGCAGTGTCTGTTACCCTCTCACCCCCCTCAACTCATCGAAGAGGCCTTTTCCACTGAAAGTTTCAAATGATGCTTTTAACAGAGAACAAGCACCACCACTAGATGGCAGTAGCACTACACTGCATTGGAGGTTTTCTACACTACATTCAACAGCCACAACTTAAAAGCAACGTGGCTTATAAGTAACATCAGATGCTTAAAGTTTAATATGTCCGCAGCCTTAGGGTTGTATCTGAATATGGATATATAATCTCAAATAATACGTGAAAAGAACTGAATATTGTGTGATTAGGTTCAACACAAATTAAACTCAGTTGTCGGTGTTTGGTATAATTTTGGGGAAAGAATTATTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248359 True 1431 TUCP 0.39 1 3245443 3246873

Neighbor

gene id symbol gene type direction distance location
CI01000051_03147600_03152676 MYOC coding upstream 92349 3147234 ~ 3153094 (+)
CI01000051_03128080_03133290 NA coding upstream 112122 3128080 ~ 3133321 (+)
CI01000051_03107566_03109607 ITPA coding upstream 135713 3107566 ~ 3109730 (+)
CI01000051_03038457_03041581 PIGC coding upstream 202710 3036852 ~ 3042733 (+)
CI01000051_03022303_03035625 TMED5 coding upstream 209588 3021494 ~ 3035855 (+)
CI01000051_03431193_03432454 JUN coding downstream 183418 3430291 ~ 3432788 (+)
CI01000051_03435613_03439371 NA coding downstream 188740 3435613 ~ 3439851 (+)
CI01000051_03443548_03451188 NA coding downstream 196675 3443548 ~ 3451814 (+)
CI01000051_03457204_03459579 NA coding downstream 210086 3456959 ~ 3459924 (+)
CI01000051_03679568_03682342 NA coding downstream 432564 3679437 ~ 3682528 (+)
G218956 NA non-coding upstream 875 3236850 ~ 3244568 (+)
G219044 NA non-coding upstream 9026 3236188 ~ 3236417 (+)
G219043 NA non-coding upstream 9401 3235688 ~ 3236042 (+)
G219041 NA non-coding upstream 12887 3231762 ~ 3232556 (+)
G219040 NA non-coding upstream 20795 3220173 ~ 3224648 (+)
G219045 NA non-coding downstream 49125 3295998 ~ 3296544 (+)
G219048 NA non-coding downstream 75799 3322672 ~ 3322970 (+)
G219050 NA non-coding downstream 79181 3326054 ~ 3326661 (+)
G219052 NA non-coding downstream 88657 3335530 ~ 3335774 (+)
G219070 NA non-coding downstream 127015 3373888 ~ 3374125 (+)
CI01000051_02060996_02061735 NA other upstream 1179360 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 2520739 637590 ~ 720669 (+)
G217075 NA other upstream 2861315 324465 ~ 384128 (+)
CI01000051_04374052_04393328 NA other downstream 1127537 4372658 ~ 4393677 (+)
G219803 NA other downstream 1668101 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 3578926 6825895 ~ 6830637 (+)
G221319 NA other downstream 4095168 7342041 ~ 7342546 (+)
G221386 NA other downstream 4162650 7401175 ~ 7413007 (+)

Expression


Co-expression Network