G219070


Basic Information

Item Value
gene id G219070
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 3373888 ~ 3374125 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU248482
TGCACATCTGGCAAATTTGGATTATGATTGTATGTGAAAAAAAAAAAAATTTATTAATGTGCAGATGGCTCAGTTTGCCAGGTCACCCTGTGAAGCCAGGCCTGTTATTAAGGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATATCATTGACTTGATATCCATTTTTTAAATTAGGAAAATTACACTGTAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248482 True 218 lncRNA 0.30 2 3373888 3374125

Neighbor

gene id symbol gene type direction distance location
CI01000051_03147600_03152676 MYOC coding upstream 220794 3147234 ~ 3153094 (+)
CI01000051_03128080_03133290 NA coding upstream 240567 3128080 ~ 3133321 (+)
CI01000051_03107566_03109607 ITPA coding upstream 264158 3107566 ~ 3109730 (+)
CI01000051_03038457_03041581 PIGC coding upstream 331155 3036852 ~ 3042733 (+)
CI01000051_03022303_03035625 TMED5 coding upstream 338033 3021494 ~ 3035855 (+)
CI01000051_03431193_03432454 JUN coding downstream 56166 3430291 ~ 3432788 (+)
CI01000051_03435613_03439371 NA coding downstream 61488 3435613 ~ 3439851 (+)
CI01000051_03443548_03451188 NA coding downstream 69423 3443548 ~ 3451814 (+)
CI01000051_03457204_03459579 NA coding downstream 82834 3456959 ~ 3459924 (+)
CI01000051_03679568_03682342 NA coding downstream 305312 3679437 ~ 3682528 (+)
G219052 NA non-coding upstream 38114 3335530 ~ 3335774 (+)
G219050 NA non-coding upstream 47227 3326054 ~ 3326661 (+)
G219048 NA non-coding upstream 50918 3322672 ~ 3322970 (+)
G219045 NA non-coding upstream 77344 3295998 ~ 3296544 (+)
G218956 NA non-coding upstream 129320 3236850 ~ 3244568 (+)
G219163 NA non-coding downstream 161635 3535760 ~ 3536015 (+)
G219154 NA non-coding downstream 163062 3537187 ~ 3537679 (+)
G219191 NA non-coding downstream 201041 3575166 ~ 3576838 (+)
G219194 NA non-coding downstream 206089 3580214 ~ 3580535 (+)
G219203 NA non-coding downstream 218975 3593100 ~ 3593330 (+)
G218981 NA other upstream 127015 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 1307805 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 2649184 637590 ~ 720669 (+)
G217075 NA other upstream 2989760 324465 ~ 384128 (+)
CI01000051_04374052_04393328 NA other downstream 1000285 4372658 ~ 4393677 (+)
G219803 NA other downstream 1540849 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 3451674 6825895 ~ 6830637 (+)
G221319 NA other downstream 3967916 7342041 ~ 7342546 (+)
G221386 NA other downstream 4035398 7401175 ~ 7413007 (+)

Expression


Co-expression Network