Gene
RNA
| Item | Value |
|---|---|
| gene id | G219163 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 3535760 ~ 3536015 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248576 | True | 256 | lncRNA | 0.34 | 1 | 3535760 | 3536015 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_03457204_03459579 | NA | coding | upstream | 75836 | 3456959 ~ 3459924 (+) |
| CI01000051_03443548_03451188 | NA | coding | upstream | 83946 | 3443548 ~ 3451814 (+) |
| CI01000051_03435613_03439371 | NA | coding | upstream | 95909 | 3435613 ~ 3439851 (+) |
| CI01000051_03431193_03432454 | JUN | coding | upstream | 102972 | 3430291 ~ 3432788 (+) |
| CI01000051_03147600_03152676 | MYOC | coding | upstream | 382666 | 3147234 ~ 3153094 (+) |
| CI01000051_03679568_03682342 | NA | coding | downstream | 143422 | 3679437 ~ 3682528 (+) |
| CI01000051_03687377_03698806 | ANGPTL1A, ANGPTL1 | coding | downstream | 151309 | 3687324 ~ 3698963 (+) |
| CI01000051_03800655_03819155 | ZYG11B, ZYG11 | coding | downstream | 264640 | 3800655 ~ 3819197 (+) |
| CI01000051_04038453_04045552 | TMEM30A, TMEM30AA, TMEM30AB | coding | downstream | 502392 | 4038407 ~ 4046528 (+) |
| CI01000051_04071144_04075444 | KCNK13B | coding | downstream | 535129 | 4070951 ~ 4077125 (+) |
| G219070 | NA | non-coding | upstream | 161635 | 3373888 ~ 3374125 (+) |
| G219052 | NA | non-coding | upstream | 199986 | 3335530 ~ 3335774 (+) |
| G219050 | NA | non-coding | upstream | 209099 | 3326054 ~ 3326661 (+) |
| G219048 | NA | non-coding | upstream | 212790 | 3322672 ~ 3322970 (+) |
| G219045 | NA | non-coding | upstream | 239216 | 3295998 ~ 3296544 (+) |
| G219154 | NA | non-coding | downstream | 1172 | 3537187 ~ 3537679 (+) |
| G219191 | NA | non-coding | downstream | 39151 | 3575166 ~ 3576838 (+) |
| G219194 | NA | non-coding | downstream | 44199 | 3580214 ~ 3580535 (+) |
| G219203 | NA | non-coding | downstream | 57085 | 3593100 ~ 3593330 (+) |
| G219195 | NA | non-coding | downstream | 59384 | 3595399 ~ 3596273 (+) |
| G218981 | NA | other | upstream | 288887 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 1469677 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 2811056 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 3151632 | 324465 ~ 384128 (+) |
| CI01000051_04374052_04393328 | NA | other | downstream | 838395 | 4372658 ~ 4393677 (+) |
| G219803 | NA | other | downstream | 1378959 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 3289784 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 3806026 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 3873508 | 7401175 ~ 7413007 (+) |
