Gene
RNA
| Item | Value |
|---|---|
| gene id | G219481 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 4151463 ~ 4151765 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU248940 | True | 214 | lncRNA | 0.32 | 2 | 4151463 | 4151765 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_04094412_04101387 | CALM2, CALM3, CALM1 | coding | upstream | 49947 | 4094354 ~ 4101516 (+) |
| CI01000051_04081532_04085798 | PSMC1B, PSMC1, PSMC1A, PSMC1.L | coding | upstream | 65541 | 4081532 ~ 4085922 (+) |
| CI01000051_04071144_04075444 | KCNK13B | coding | upstream | 74338 | 4070951 ~ 4077125 (+) |
| CI01000051_04038453_04045552 | TMEM30A, TMEM30AA, TMEM30AB | coding | upstream | 104935 | 4038407 ~ 4046528 (+) |
| CI01000051_03800655_03819155 | ZYG11B, ZYG11 | coding | upstream | 332266 | 3800655 ~ 3819197 (+) |
| CI01000051_04155754_04157992 | NFKBIAA | coding | downstream | 3919 | 4155684 ~ 4158329 (+) |
| CI01000051_04374052_04393328 | NA | coding | downstream | 220893 | 4372658 ~ 4393677 (+) |
| CI01000051_04419475_04464134 | NA | coding | downstream | 267505 | 4419270 ~ 4464166 (+) |
| CI01000051_04763063_04778692 | NA | coding | downstream | 610731 | 4762496 ~ 4779082 (+) |
| CI01000051_04796878_04799272 | FLRT2 | coding | downstream | 645113 | 4796878 ~ 4799321 (+) |
| G219468 | NA | non-coding | upstream | 28526 | 4122548 ~ 4122937 (+) |
| G219452 | NA | non-coding | upstream | 86610 | 4064401 ~ 4064853 (+) |
| G219451 | NA | non-coding | upstream | 88010 | 4063254 ~ 4063453 (+) |
| G219440 | NA | non-coding | upstream | 95022 | 4056199 ~ 4056441 (+) |
| G219484 | NA | non-coding | downstream | 2677 | 4154442 ~ 4154766 (+) |
| G219497 | NA | non-coding | downstream | 44762 | 4196527 ~ 4197145 (+) |
| G219534 | NA | non-coding | downstream | 84931 | 4236696 ~ 4237117 (+) |
| G219539 | NA | non-coding | downstream | 93413 | 4245178 ~ 4245849 (+) |
| G219543 | NA | non-coding | downstream | 95853 | 4247618 ~ 4247819 (+) |
| G218981 | NA | other | upstream | 904590 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 2085380 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 3426759 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 3767335 | 324465 ~ 384128 (+) |
| G219803 | NA | other | downstream | 763209 | 4914974 ~ 5052033 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 2674034 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 3190276 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 3257758 | 7401175 ~ 7413007 (+) |
