G219484


Basic Information

Item Value
gene id G219484
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 4154442 ~ 4154766 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU248943
CTGAATGCCAGTACATTAGATATGAAATATGTAAGCAAGTTACATCTGCAAGCAAACAAACTGATGTCAATGTTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTTCTCAGAATTTTAATACACATGTCTGAACCATTTTTGCAATTACATTTGAGGAACCAGGCCTGCCTTGATCTGTATTAGACGCCTTACATCTGATAAAAAAAAGTCCAAGAATGCTTCTCAGACACAGAATTTGTGTCAAGGTGATTTTTAGTGGATATATAATAAAGTCAGTTCCCCTTGTAAGTTCCCACACGCTTTCTAGCAGAGTAACCACAGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248943 True 325 lncRNA 0.34 1 4154442 4154766

Neighbor

gene id symbol gene type direction distance location
CI01000051_04094412_04101387 CALM2, CALM3, CALM1 coding upstream 52926 4094354 ~ 4101516 (+)
CI01000051_04081532_04085798 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding upstream 68520 4081532 ~ 4085922 (+)
CI01000051_04071144_04075444 KCNK13B coding upstream 77317 4070951 ~ 4077125 (+)
CI01000051_04038453_04045552 TMEM30A, TMEM30AA, TMEM30AB coding upstream 107914 4038407 ~ 4046528 (+)
CI01000051_03800655_03819155 ZYG11B, ZYG11 coding upstream 335245 3800655 ~ 3819197 (+)
CI01000051_04155754_04157992 NFKBIAA coding downstream 918 4155684 ~ 4158329 (+)
CI01000051_04374052_04393328 NA coding downstream 217892 4372658 ~ 4393677 (+)
CI01000051_04419475_04464134 NA coding downstream 264504 4419270 ~ 4464166 (+)
CI01000051_04763063_04778692 NA coding downstream 607730 4762496 ~ 4779082 (+)
CI01000051_04796878_04799272 FLRT2 coding downstream 642112 4796878 ~ 4799321 (+)
G219481 NA non-coding upstream 2677 4151463 ~ 4151765 (+)
G219468 NA non-coding upstream 31505 4122548 ~ 4122937 (+)
G219452 NA non-coding upstream 89589 4064401 ~ 4064853 (+)
G219451 NA non-coding upstream 90989 4063254 ~ 4063453 (+)
G219497 NA non-coding downstream 41761 4196527 ~ 4197145 (+)
G219534 NA non-coding downstream 81930 4236696 ~ 4237117 (+)
G219539 NA non-coding downstream 90412 4245178 ~ 4245849 (+)
G219543 NA non-coding downstream 92852 4247618 ~ 4247819 (+)
G219547 NA non-coding downstream 95100 4249866 ~ 4250085 (+)
G218981 NA other upstream 907569 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 2088359 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 3429738 637590 ~ 720669 (+)
G217075 NA other upstream 3770314 324465 ~ 384128 (+)
G219803 NA other downstream 760208 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 2671033 6825895 ~ 6830637 (+)
G221319 NA other downstream 3187275 7342041 ~ 7342546 (+)
G221386 NA other downstream 3254757 7401175 ~ 7413007 (+)

Expression


Co-expression Network