Gene
RNA
| Item | Value |
|---|---|
| gene id | G219775 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 4826265 ~ 4826468 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: testis-expressed protein 10 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU249258 | True | 204 | lncRNA | 0.42 | 1 | 4826265 | 4826468 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_04796878_04799272 | FLRT2 | coding | upstream | 26944 | 4796878 ~ 4799321 (+) |
| CI01000051_04763063_04778692 | NA | coding | upstream | 47183 | 4762496 ~ 4779082 (+) |
| CI01000051_04419475_04464134 | NA | coding | upstream | 362099 | 4419270 ~ 4464166 (+) |
| CI01000051_04374052_04393328 | NA | coding | upstream | 432588 | 4372658 ~ 4393677 (+) |
| CI01000051_04155754_04157992 | NFKBIAA | coding | upstream | 667936 | 4155684 ~ 4158329 (+) |
| CI01000051_05072860_05074568 | GLRX5 | coding | downstream | 246161 | 5072629 ~ 5074874 (+) |
| CI01000051_05126681_05142536 | NA | coding | downstream | 299283 | 5125751 ~ 5142617 (+) |
| CI01000051_05174862_05175926 | NA | coding | downstream | 347640 | 5174108 ~ 5176507 (+) |
| CI01000051_05254556_05270993 | MEIS2B, MEIS2 | coding | downstream | 428088 | 5254556 ~ 5271828 (+) |
| CI01000051_05296858_05301152 | NA | coding | downstream | 470216 | 5296684 ~ 5301334 (+) |
| G219662 | NA | non-coding | upstream | 273793 | 4551837 ~ 4552472 (+) |
| G219624 | NA | non-coding | upstream | 370263 | 4455699 ~ 4456002 (+) |
| G219620 | NA | non-coding | upstream | 376645 | 4449413 ~ 4449620 (+) |
| G219616 | NA | non-coding | upstream | 398286 | 4427675 ~ 4427979 (+) |
| G219615 | NA | non-coding | upstream | 403473 | 4422530 ~ 4422792 (+) |
| G219798 | NA | non-coding | downstream | 66768 | 4893236 ~ 4894179 (+) |
| G219819 | NA | non-coding | downstream | 105875 | 4932343 ~ 4932850 (+) |
| G219835 | NA | non-coding | downstream | 157927 | 4984395 ~ 5046943 (+) |
| G219803 | NA | non-coding | downstream | 196705 | 4914974 ~ 5052033 (+) |
| G219859 | NA | non-coding | downstream | 232204 | 5058672 ~ 5058912 (+) |
| G218981 | NA | other | upstream | 1579392 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 2760182 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 4101561 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 4442137 | 324465 ~ 384128 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 1999331 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 2515573 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 2583055 | 7401175 ~ 7413007 (+) |
| CI01000051_08211233_08214513 | NA | other | downstream | 3279175 | 8209722 ~ 8214696 (+) |
