G219798


Basic Information

Item Value
gene id G219798
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 4893236 ~ 4894179 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU249281
AAATGTCAAAAGTGGTACCAAAAGTAGTTCAAATGATGATGAGTTCCAGTCACAGTCCTCTCTGGCGGTAATAGTTTTTTATAGGGTACAGAGCAGAATTTAACTTATTAATCCATGAAAATATGATGAATCCGGCTTCTCTCCGTGAAGGCGCGCACTCATTTCAAATGTCAATCCACTGAAACACGGCATGTCGTAATCTGTGACGAAGCAGGTGAGAACCAATGAGCGTTTGATATCAGTGCCGTAAACCATGTCGTAACACTTCTCGAGGGTGGCGCTACTTTCAAATTTGAATCATAACGAGTGCGAGCTTTGACTGTGATGGTCGCTGTTGCTGAGAATCAAAATGAAGATCGATGGATAAAGGGCTGAATTTGGATCTGTTCCTTACAAACATATGGATTTTAAAGATTGGGAGTACAGCGAACAAATAAAATTGATGGGATTTGTGAATTTATGTTGTGTTTTGGTGTATCTTATGGTTGTATTGTCAGTCACTGCATAGGAGAAAACGCCTTCTGTGTCGCACAGCAAACAAACTAAATATTACAAAATGGTTAAACAATTACAGAAAATTTATTCATAAGGTTTTAAATTGTAGTCTTGTTTAACATTATGTAATCCTCCGAAACGAGCAGCACAAGTCACAAACAGAAATGTTAGTTCATATTAAGTAGATGAGTAAACAACATTAAATCATTAAAGCCACGATTTTAATATTAATACATGGGAATTCATATACATTCACACTTTACGTTACATGATTTACGTTTTTATTGCTGTTAATACGTAAGTATTTTTACGTTTTAGTCCTCTAAATACGTCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249281 True 831 lncRNA 0.36 3 4893236 4894179

Neighbor

gene id symbol gene type direction distance location
CI01000051_04796878_04799272 FLRT2 coding upstream 93915 4796878 ~ 4799321 (+)
CI01000051_04763063_04778692 NA coding upstream 114154 4762496 ~ 4779082 (+)
CI01000051_04419475_04464134 NA coding upstream 429070 4419270 ~ 4464166 (+)
CI01000051_04374052_04393328 NA coding upstream 499559 4372658 ~ 4393677 (+)
CI01000051_04155754_04157992 NFKBIAA coding upstream 734907 4155684 ~ 4158329 (+)
CI01000051_05072860_05074568 GLRX5 coding downstream 178450 5072629 ~ 5074874 (+)
CI01000051_05126681_05142536 NA coding downstream 231572 5125751 ~ 5142617 (+)
CI01000051_05174862_05175926 NA coding downstream 279929 5174108 ~ 5176507 (+)
CI01000051_05254556_05270993 MEIS2B, MEIS2 coding downstream 360377 5254556 ~ 5271828 (+)
CI01000051_05296858_05301152 NA coding downstream 402505 5296684 ~ 5301334 (+)
G219775 NA non-coding upstream 66768 4826265 ~ 4826468 (+)
G219662 NA non-coding upstream 340764 4551837 ~ 4552472 (+)
G219624 NA non-coding upstream 437234 4455699 ~ 4456002 (+)
G219620 NA non-coding upstream 443616 4449413 ~ 4449620 (+)
G219616 NA non-coding upstream 465257 4427675 ~ 4427979 (+)
G219819 NA non-coding downstream 38164 4932343 ~ 4932850 (+)
G219835 NA non-coding downstream 90216 4984395 ~ 5046943 (+)
G219803 NA non-coding downstream 128994 4914974 ~ 5052033 (+)
G219859 NA non-coding downstream 164493 5058672 ~ 5058912 (+)
G219861 NA non-coding downstream 166263 5060442 ~ 5060658 (+)
G218981 NA other upstream 1646363 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 2827153 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 4168532 637590 ~ 720669 (+)
G217075 NA other upstream 4509108 324465 ~ 384128 (+)
CI01000051_06825895_06830637 NA other downstream 1931620 6825895 ~ 6830637 (+)
G221319 NA other downstream 2447862 7342041 ~ 7342546 (+)
G221386 NA other downstream 2515344 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 3211464 8209722 ~ 8214696 (+)

Expression


Co-expression Network