Gene
RNA
| Item | Value |
|---|---|
| gene id | G219835 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 4984395 ~ 5046943 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU249349 | True | 1602 | lncRNA | 0.33 | 2 | 4984395 | 5046943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_04796878_04799272 | FLRT2 | coding | upstream | 185074 | 4796878 ~ 4799321 (+) |
| CI01000051_04763063_04778692 | NA | coding | upstream | 205313 | 4762496 ~ 4779082 (+) |
| CI01000051_04419475_04464134 | NA | coding | upstream | 520229 | 4419270 ~ 4464166 (+) |
| CI01000051_04374052_04393328 | NA | coding | upstream | 590718 | 4372658 ~ 4393677 (+) |
| CI01000051_04155754_04157992 | NFKBIAA | coding | upstream | 826066 | 4155684 ~ 4158329 (+) |
| CI01000051_05072860_05074568 | GLRX5 | coding | downstream | 25686 | 5072629 ~ 5074874 (+) |
| CI01000051_05126681_05142536 | NA | coding | downstream | 78808 | 5125751 ~ 5142617 (+) |
| CI01000051_05174862_05175926 | NA | coding | downstream | 127165 | 5174108 ~ 5176507 (+) |
| CI01000051_05254556_05270993 | MEIS2B, MEIS2 | coding | downstream | 207613 | 5254556 ~ 5271828 (+) |
| CI01000051_05296858_05301152 | NA | coding | downstream | 249741 | 5296684 ~ 5301334 (+) |
| G219819 | NA | non-coding | upstream | 51545 | 4932343 ~ 4932850 (+) |
| G219798 | NA | non-coding | upstream | 90216 | 4893236 ~ 4894179 (+) |
| G219775 | NA | non-coding | upstream | 157927 | 4826265 ~ 4826468 (+) |
| G219662 | NA | non-coding | upstream | 431923 | 4551837 ~ 4552472 (+) |
| G219624 | NA | non-coding | upstream | 528393 | 4455699 ~ 4456002 (+) |
| G219859 | NA | non-coding | downstream | 11729 | 5058672 ~ 5058912 (+) |
| G219861 | NA | non-coding | downstream | 13499 | 5060442 ~ 5060658 (+) |
| G219866 | NA | non-coding | downstream | 21515 | 5068458 ~ 5068720 (+) |
| G219867 | NA | non-coding | downstream | 22121 | 5069064 ~ 5069281 (+) |
| G219868 | NA | non-coding | downstream | 22741 | 5069684 ~ 5069908 (+) |
| G218981 | NA | other | upstream | 1737522 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 2918312 | 2060534 ~ 2062355 (+) |
| CI01000051_00638200_00720543 | CDC42BPB | other | upstream | 4259691 | 637590 ~ 720669 (+) |
| G217075 | NA | other | upstream | 4600267 | 324465 ~ 384128 (+) |
| CI01000051_06825895_06830637 | NA | other | downstream | 1778856 | 6825895 ~ 6830637 (+) |
| G221319 | NA | other | downstream | 2295098 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 2362580 | 7401175 ~ 7413007 (+) |
| CI01000051_08211233_08214513 | NA | other | downstream | 3058700 | 8209722 ~ 8214696 (+) |
| G222727 | NA | other | downstream | 3295999 | 8342942 ~ 8343448 (+) |
