G220730


Basic Information

Item Value
gene id G220730
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 5205426 ~ 5205628 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU250336
GTCTCATTGTTAATACGTAGGTATTAATACGTAACTTTCAAAGACACAAAACGTACATTTTTGTACGTTTAGAAAGGTGCTAAAACGTACAATATTGACGTAATTATGGCACTAAAACGTAAAAATACTTACGTTTTTACAGCGAAAAAAACGTAAAATATTTACGAATCTTATCATGTCTTAAAGATATATGTATAATTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250336 True 203 lncRNA 0.28 1 5205426 5205628

Neighbor

gene id symbol gene type direction distance location
CI01000051_05174862_05175926 NA coding upstream 28919 5174108 ~ 5176507 (+)
CI01000051_05126681_05142536 NA coding upstream 62809 5125751 ~ 5142617 (+)
CI01000051_05072860_05074568 GLRX5 coding upstream 130552 5072629 ~ 5074874 (+)
CI01000051_04796878_04799272 FLRT2 coding upstream 406105 4796878 ~ 4799321 (+)
CI01000051_04763063_04778692 NA coding upstream 426344 4762496 ~ 4779082 (+)
CI01000051_05254556_05270993 MEIS2B, MEIS2 coding downstream 48928 5254556 ~ 5271828 (+)
CI01000051_05296858_05301152 NA coding downstream 91056 5296684 ~ 5301334 (+)
CI01000051_05314994_05317995 ACTC1B, ACTA2, ACTA1, MGC53823, ACTC1, MGC75582, ACT3, ACTC1A, ACTA1A, ACT2, ACTC1.L coding downstream 108816 5314444 ~ 5318185 (+)
CI01000051_05320361_05322570 GJD2B, GJD2 coding downstream 114733 5320361 ~ 5323905 (+)
CI01000051_05401881_05405868 NA coding downstream 196253 5401881 ~ 5405886 (+)
G220727 NA non-coding upstream 2675 5202409 ~ 5202751 (+)
G220726 NA non-coding upstream 5742 5199405 ~ 5199684 (+)
G220725 NA non-coding upstream 6429 5198774 ~ 5198997 (+)
G220701 NA non-coding upstream 27859 5177338 ~ 5177567 (+)
G219895 NA non-coding upstream 60544 5144671 ~ 5144882 (+)
G220773 NA non-coding downstream 143179 5348807 ~ 5406672 (+)
G220807 NA non-coding downstream 170054 5375682 ~ 5376525 (+)
G220830 NA non-coding downstream 227316 5432944 ~ 5433210 (+)
G220844 NA non-coding downstream 277877 5483505 ~ 5484126 (+)
G220846 NA non-coding downstream 279850 5485478 ~ 5485721 (+)
G219803 NA other upstream 153393 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 830096 4372658 ~ 4393677 (+)
G218981 NA other upstream 1958553 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 3139343 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 4480722 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 1620171 6825895 ~ 6830637 (+)
G221319 NA other downstream 2136413 7342041 ~ 7342546 (+)
G221386 NA other downstream 2203895 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 2900015 8209722 ~ 8214696 (+)
G222727 NA other downstream 3137314 8342942 ~ 8343448 (+)

Expression


Co-expression Network