G221008


Basic Information

Item Value
gene id G221008
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 6132932 ~ 6133608 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU250681
CGGCGAATGGCACGGTGGATTGTGTTCACCAAAAATGTTTTCTGGAAGTATTCCTGAGCCCATGTTGTGATTTCCATTACAGTAGCATTCCTTTAAGTGATGCAGTGCCATCTAAGGGCCCGAAGATCACGGGCATCCAGTATGGTTTTCCGGCCTTGACCCTTACGCACAGAGATTGTTCCAGATTCTCTGAATCTTTGGATGATATTATGCACTGTAGATGATGATAACTTCAAACTCTTTGCAATTTTTCTCTGAGAAACTCCTTTCTGATATTGCCTCACTATTTTTCGCCGCAGCATTGGGGGAATTGGTGATCCTCTGCCCATCTTGACTTCTGAGAGACACTGCCACTCTGAGAGGCTCTTTTTATACCCAATCATGTTGCCAATTGACCTAATAAGTTGCAAACTGGTCCTCCAGCTGTTCCTTATATGTACATTTAACTTTTCCGGCCTCTTATTGCTACCTGTCCCAACTTTTTTGGAATGTGTAGCTCTCATGAAATCCAAAATGAGCCAATATTTGGCATGACATTTCAAAATGTCTCACTTTCAACATTTGATATGTTATTTATATTCCATTGTGAATAAAATATAAGTTTATGAGATTTGTAAATTATTGCATTCCTTTTTTATTCACAATTTGTACAGTGTCCCAACTTTTTTGGAATCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250681 True 677 lncRNA 0.40 1 6132932 6133608

Neighbor

gene id symbol gene type direction distance location
CI01000051_06113450_06128623 TAGAPB coding upstream 3848 6113450 ~ 6129084 (+)
CI01000051_05996289_06007664 RHAG coding upstream 124374 5995995 ~ 6008558 (+)
CI01000051_05969849_05970699 NA coding upstream 161463 5969849 ~ 5971469 (+)
CI01000051_05955881_05966250 NA coding upstream 166507 5955417 ~ 5966425 (+)
CI01000051_05935542_05939529 NA coding upstream 193300 5935443 ~ 5939632 (+)
CI01000051_06136031_06140543 RSPH3 coding downstream 2423 6136031 ~ 6140633 (+)
CI01000051_06155906_06164505 EZRB, RDX, EZR coding downstream 22298 6155906 ~ 6164505 (+)
CI01000051_06167413_06171890 NA coding downstream 33595 6167203 ~ 6172507 (+)
CI01000051_06286985_06304439 KCNK3A, KCNK3 coding downstream 153377 6286985 ~ 6304439 (+)
CI01000051_06315270_06317555 NA coding downstream 181662 6315270 ~ 6318626 (+)
G221001 NA non-coding upstream 40238 6092471 ~ 6092694 (+)
G220966 NA non-coding upstream 42571 6088499 ~ 6090361 (+)
G220998 NA non-coding upstream 106030 6026615 ~ 6026902 (+)
G220996 NA non-coding upstream 106978 6025733 ~ 6025954 (+)
G220995 NA non-coding upstream 108802 6023899 ~ 6024130 (+)
G221026 NA non-coding downstream 61240 6194848 ~ 6195162 (+)
G221027 NA non-coding downstream 61831 6195439 ~ 6195649 (+)
G221014 NA non-coding downstream 65820 6199428 ~ 6199933 (+)
G221013 NA non-coding downstream 66725 6200333 ~ 6201249 (+)
G221057 NA non-coding downstream 177344 6310952 ~ 6311202 (+)
G219803 NA other upstream 1080899 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 1757602 4372658 ~ 4393677 (+)
G218981 NA other upstream 2886059 3245443 ~ 3246873 (+)
CI01000051_02060996_02061735 NA other upstream 4066849 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 5408228 637590 ~ 720669 (+)
CI01000051_06825895_06830637 NA other downstream 692191 6825895 ~ 6830637 (+)
G221319 NA other downstream 1208433 7342041 ~ 7342546 (+)
G221386 NA other downstream 1275915 7401175 ~ 7413007 (+)
CI01000051_08211233_08214513 NA other downstream 1972035 8209722 ~ 8214696 (+)
G222727 NA other downstream 2209334 8342942 ~ 8343448 (+)

Expression


Co-expression Network