Gene
RNA
| Item | Value |
|---|---|
| gene id | G221256 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 7043663 ~ 7152095 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU250969 | False | 286 | lncRNA | 0.37 | 2 | 7043663 | 7152004 |
| TU250968 | False | 218 | lncRNA | 0.33 | 2 | 7043731 | 7152004 |
| TU250970 | True | 309 | lncRNA | 0.31 | 2 | 7043731 | 7152095 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_07015896_07020569 | NA | coding | upstream | 23049 | 7015383 ~ 7020614 (+) |
| CI01000051_06985393_07011299 | CNKSR3 | coding | upstream | 32260 | 6983354 ~ 7011403 (+) |
| CI01000051_06970612_06971675 | NA | coding | upstream | 71821 | 6970422 ~ 6971842 (+) |
| CI01000051_06948569_06952962 | NA | coding | upstream | 89567 | 6948569 ~ 6954096 (+) |
| CI01000051_06917282_06944243 | TTC13 | coding | upstream | 99396 | 6917282 ~ 6944267 (+) |
| CI01000051_07170752_07194524 | NA | coding | downstream | 18657 | 7170752 ~ 7194524 (+) |
| CI01000051_07215332_07217167 | NA | coding | downstream | 63237 | 7215332 ~ 7217708 (+) |
| CI01000051_07253002_07255432 | PTGFR | coding | downstream | 100106 | 7252201 ~ 7255620 (+) |
| CI01000051_07259968_07261598 | BT3L4, BTF3L4 | coding | downstream | 107623 | 7259718 ~ 7261731 (+) |
| CI01000051_07267084_07283654 | ZFYVE9B | coding | downstream | 114916 | 7267011 ~ 7284015 (+) |
| G221254 | NA | non-coding | upstream | 95768 | 6947384 ~ 6947895 (+) |
| G221208 | NA | non-coding | upstream | 131952 | 6847641 ~ 6911711 (+) |
| G221188 | NA | non-coding | upstream | 247057 | 6794991 ~ 6796606 (+) |
| G221194 | NA | non-coding | upstream | 249727 | 6785486 ~ 6793936 (+) |
| CI01000051_06655818_06730954 | NA | non-coding | upstream | 312378 | 6655818 ~ 6731285 (+) |
| G221280 | NA | non-coding | downstream | 9071 | 7161166 ~ 7161367 (+) |
| G221283 | NA | non-coding | downstream | 55276 | 7207371 ~ 7207573 (+) |
| G221351 | NA | non-coding | downstream | 70622 | 7222717 ~ 7222987 (+) |
| G221353 | NA | non-coding | downstream | 72795 | 7224890 ~ 7225167 (+) |
| CI01000051_06825895_06830637 | NA | other | upstream | 210595 | 6825895 ~ 6830637 (+) |
| G219803 | NA | other | upstream | 1991630 | 4914974 ~ 5052033 (+) |
| CI01000051_04374052_04393328 | NA | other | upstream | 2668333 | 4372658 ~ 4393677 (+) |
| G218981 | NA | other | upstream | 3796790 | 3245443 ~ 3246873 (+) |
| CI01000051_02060996_02061735 | NA | other | upstream | 4977580 | 2060534 ~ 2062355 (+) |
| G221319 | NA | other | downstream | 189946 | 7342041 ~ 7342546 (+) |
| G221386 | NA | other | downstream | 257428 | 7401175 ~ 7413007 (+) |
| CI01000051_08211233_08214513 | NA | other | downstream | 953548 | 8209722 ~ 8214696 (+) |
| G222727 | NA | other | downstream | 1190847 | 8342942 ~ 8343448 (+) |
