G221336


Basic Information

Item Value
gene id G221336
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7422923 ~ 7425419 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU251056
CTGCTTGTCGATAAACTCCCTGGTGTCTTTCTCAATGTGGCCCTCATAGAGATTGGTTGTCATGTTCATAAGGCCGATTTTGGAGAGCCCAAAGTCAGTGAGTTTAATATGCCCCATTGAAGTAATCAAGAGGTTGTCTGGTTTGAGATCTCTGTGCACAATGCCGTAACTGTGGAGGTACTCCAGTGCCAAAACGGTCTCCGCAAAGTACATCCTGGTCATATCTACAGGAAGTGGGCCCATGTTCTTTAGCAGAGTGGCACAATCACCACCTTCCACATACTCCATGACCATGCACAGATGTCTGCGGGTCTCGAAGGAGCAGAACATGCTGACCACAAAGGGATTCTCTGCAAATGTCAGGATGTCTCGCTCCACAAACACCTGCTGGATCTGGTTTCGCAGAATCAGGTTTTGTCGGTTGATCTTTTTCATTGCAAATCGTTGGCGAGTTTCTTTATGCCTTACCAGATACACAGCCCCATAAGCCCCATTACTGATGAGTTTTAAGGTCTCAAAATCGCTCTCCAGTGGTTTTCTTCGTAGTGGTGTGGGTGAAGATTTATTCTGCTCTGCAGTTTCTTCAGAATCAACTGTCAGTGTGGGGCCAGAGTCGTACTGCTCCTCTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251056 True 631 lncRNA 0.47 5 7422923 7425419

Neighbor

gene id symbol gene type direction distance location
CI01000051_07391277_07399712 ABCB11B, ABCB11 coding upstream 23137 7390634 ~ 7399786 (+)
CI01000051_07378590_07389158 ABCB11B, ABCB11 coding upstream 33353 7378590 ~ 7389570 (+)
CI01000051_07367270_07370738 ATP5B coding upstream 52045 7366852 ~ 7370878 (+)
CI01000051_07345863_07353841 MKNK1 coding upstream 67803 7345863 ~ 7355120 (+)
CI01000051_07337005_07340657 MOB3C, MOB3C.S, MOBKL2C coding upstream 82231 7336853 ~ 7340692 (+)
CI01000051_07470914_07489207 LRP1AB, LRP1 coding downstream 45495 7470914 ~ 7489242 (+)
CI01000051_07507549_07530087 HOMER3 coding downstream 82130 7507549 ~ 7530087 (+)
CI01000051_07534938_07540104 NA coding downstream 107220 7532639 ~ 7540418 (+)
CI01000051_07542167_07549737 ARRDC2 coding downstream 116748 7542167 ~ 7550660 (+)
CI01000051_07611022_07612093 NA coding downstream 185030 7610449 ~ 7612093 (+)
G221386 NA non-coding upstream 9916 7401175 ~ 7413007 (+)
G221393 NA non-coding upstream 46718 7375973 ~ 7376205 (+)
G221385 NA non-coding upstream 49189 7373383 ~ 7373734 (+)
G221378 NA non-coding upstream 91055 7331657 ~ 7331868 (+)
G221311 NA non-coding upstream 129170 7292239 ~ 7293753 (+)
G221406 NA non-coding downstream 25060 7450479 ~ 7450890 (+)
G221408 NA non-coding downstream 26321 7451740 ~ 7452011 (+)
G221409 NA non-coding downstream 29912 7455331 ~ 7455537 (+)
G221333 NA non-coding downstream 378932 7804351 ~ 7840774 (+)
CI01000051_07806350_07831779 GRIN3B non-coding downstream 394278 7806350 ~ 7832334 (+)
G221319 NA other upstream 80377 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 589855 6825895 ~ 6830637 (+)
G219803 NA other upstream 2370890 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 3047593 4372658 ~ 4393677 (+)
CI01000051_08211233_08214513 NA other downstream 680224 8209722 ~ 8214696 (+)
G222727 NA other downstream 917523 8342942 ~ 8343448 (+)

Expression


Co-expression Network