G221409


Basic Information

Item Value
gene id G221409
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7455331 ~ 7455537 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU251136
TGGGAACATACAGCTGCTAAATAAACAGGTAAATATGTCAAAAGTCCTCAAAACACAAGAGGCCTACTACATTTCTTCTAGGAATTAACAACACAAAGAGCAGGATAACTGAGACAGGAACAAGACTTCAGGTAAGAGTCGAATCCTTTTCACACTATACTTGAGCAATACTTATCTTTAATAGCTGAGGAGATATAACAATACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251136 True 207 lncRNA 0.36 1 7455331 7455537

Neighbor

gene id symbol gene type direction distance location
CI01000051_07391277_07399712 ABCB11B, ABCB11 coding upstream 55545 7390634 ~ 7399786 (+)
CI01000051_07378590_07389158 ABCB11B, ABCB11 coding upstream 65761 7378590 ~ 7389570 (+)
CI01000051_07367270_07370738 ATP5B coding upstream 84453 7366852 ~ 7370878 (+)
CI01000051_07345863_07353841 MKNK1 coding upstream 100211 7345863 ~ 7355120 (+)
CI01000051_07337005_07340657 MOB3C, MOB3C.S, MOBKL2C coding upstream 114639 7336853 ~ 7340692 (+)
CI01000051_07470914_07489207 LRP1AB, LRP1 coding downstream 15377 7470914 ~ 7489242 (+)
CI01000051_07507549_07530087 HOMER3 coding downstream 52012 7507549 ~ 7530087 (+)
CI01000051_07534938_07540104 NA coding downstream 77102 7532639 ~ 7540418 (+)
CI01000051_07542167_07549737 ARRDC2 coding downstream 86630 7542167 ~ 7550660 (+)
CI01000051_07611022_07612093 NA coding downstream 154912 7610449 ~ 7612093 (+)
G221408 NA non-coding upstream 3320 7451740 ~ 7452011 (+)
G221406 NA non-coding upstream 4441 7450479 ~ 7450890 (+)
G221336 NA non-coding upstream 29912 7422923 ~ 7425419 (+)
G221386 NA non-coding upstream 42324 7401175 ~ 7413007 (+)
G221393 NA non-coding upstream 79126 7375973 ~ 7376205 (+)
G221333 NA non-coding downstream 348814 7804351 ~ 7840774 (+)
CI01000051_07806350_07831779 GRIN3B non-coding downstream 364160 7806350 ~ 7832334 (+)
G221530 NA non-coding downstream 540485 7996022 ~ 7996297 (+)
G221538 NA non-coding downstream 553378 8008915 ~ 8009351 (+)
G221539 NA non-coding downstream 560707 8016244 ~ 8016535 (+)
G221319 NA other upstream 112785 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 622263 6825895 ~ 6830637 (+)
G219803 NA other upstream 2403298 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 3080001 4372658 ~ 4393677 (+)
CI01000051_08211233_08214513 NA other downstream 650106 8209722 ~ 8214696 (+)
G222727 NA other downstream 887405 8342942 ~ 8343448 (+)

Expression


Co-expression Network