G221333


Basic Information

Item Value
gene id G221333
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7804351 ~ 7840774 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU251053
TAGCTTTCTGGGCATTGAAAGTGTTAATTGTCTTGCTGGCAATGCAGGCCTCACTGAGCCATTGGATTTTATGAAAAATATCTTCATTTGTGTTCCGAAGATGAACAAAGGTCTTACGGGTGTGGAACGACAAGAGGGTGAGTATTTAATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAAGGTGAAGAATTAAGTATGAAACCATCAGGAATTTATCTTCCAGAATCTGGCAGTAATTTTTGGTGGATCGTTTTTATTCCATATCTGCAAGACGGACTTTTCAGGATAGGAGATGGAATAAAAATGAACTCCCACACCTTACTGCCAGATTCTGGAAGATAAATTCTTCAAACAGTGGTATAAGAGGATGTGGTGCTGGTCCTTCAAGAGTCACTCTCAATCTGTGTGTCTATAAAGCCTATAAAAACCAGTCTTCATGTATTTTACAACACTTCAGCTTGTGATTCTTATTAAATGGGAGTCATTTTTAGGATTCTTTACCTAACCTAAGTCTCTGAGATTCTGACAACTTGCACTTCTGGAGACTCCAGGTAGGTTTCAGTTCTGGAAAATGGTGGGGCTGGAGACTGATGGTTTCTGATAGTTTCAACCTAAATTCTTAATTCTTTTGCAGTTAACGTGTCTTTTCTTCTCCACCTGTTTTTGTCTGACCCTGCTGACCCAATGAGCATTTTGCTGTCTATTGGTCATGCCTTAACTTTGCAATTTCTAGTATTGCATTTGTATTGCATTCTTCTCATGAGCATTTAATAATTTTTGACTTTTCAGTCTGAGTTAAATCTTCTTGGCTCATTTAGCCTGTAAAAGAAAACCTGCCTAATAATTATGCACACCTAAATAAGGCGTTTTATATTTCCAGCCTTCATGAACAATTATATATCACTTATAAATGATTAAATACAAAATTAATAATAGTTATTAAAATTGATGTGGTTTGGAATTGGTAAAACGTGCTTGGAAAAAAATATGATCAGAAAATCAACTTGCCTAATAATTCTACACACGGTGTATTTACAAATGACTCATGTATTTCTAAACCCAATGCAAACATTTCTCTTTGTGGCCTTTAGTTAGAGGTGGCTGAAATGCAACTGCCTATGCAGCTTTCCTTAAGCCTTTATCTGACTGAGTTCTTCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251053 True 1167 lncRNA 0.36 2 7804351 7840774

Neighbor

gene id symbol gene type direction distance location
CI01000051_07634084_07726089 NA coding upstream 78242 7633879 ~ 7726109 (+)
CI01000051_07611022_07612093 NA coding upstream 192258 7610449 ~ 7612093 (+)
CI01000051_07542167_07549737 ARRDC2 coding upstream 253691 7542167 ~ 7550660 (+)
CI01000051_07534938_07540104 NA coding upstream 263933 7532639 ~ 7540418 (+)
CI01000051_07507549_07530087 HOMER3 coding upstream 274264 7507549 ~ 7530087 (+)
CI01000051_07855788_07865402 MED16 coding downstream 14466 7855240 ~ 7865625 (+)
CI01000051_07873312_07878328 PLPPR3B, PLPPR3 coding downstream 32303 7873077 ~ 7878627 (+)
CI01000051_07913334_07929103 PALM1A, PALM coding downstream 72560 7913334 ~ 7929182 (+)
CI01000051_07938052_07941645 MISP coding downstream 96918 7937692 ~ 7942111 (+)
CI01000051_07946087_07950464 NA coding downstream 105242 7946016 ~ 7951481 (+)
G221409 NA non-coding upstream 348814 7455331 ~ 7455537 (+)
G221408 NA non-coding upstream 352340 7451740 ~ 7452011 (+)
G221406 NA non-coding upstream 353461 7450479 ~ 7450890 (+)
G221336 NA non-coding upstream 378932 7422923 ~ 7425419 (+)
G221386 NA non-coding upstream 391344 7401175 ~ 7413007 (+)
G221530 NA non-coding downstream 155248 7996022 ~ 7996297 (+)
G221538 NA non-coding downstream 168141 8008915 ~ 8009351 (+)
G221539 NA non-coding downstream 175470 8016244 ~ 8016535 (+)
G221552 NA non-coding downstream 200843 8041617 ~ 8041854 (+)
G222631 NA non-coding downstream 383176 8223950 ~ 8224280 (+)
G221319 NA other upstream 461805 7342041 ~ 7342546 (+)
CI01000051_06825895_06830637 NA other upstream 971283 6825895 ~ 6830637 (+)
G219803 NA other upstream 2752318 4914974 ~ 5052033 (+)
CI01000051_04374052_04393328 NA other upstream 3429021 4372658 ~ 4393677 (+)
CI01000051_08211233_08214513 NA other downstream 264869 8209722 ~ 8214696 (+)
G222727 NA other downstream 502168 8342942 ~ 8343448 (+)

Expression


Co-expression Network